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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3834400 |
| Transcript ID | Lj1g3v3834400.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chloride channel protein CLC-b-like [Cicer arietinum] gi|502164637|ref|XP_004513192.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 87 | 87 | – | – | |
| PANTHER | 3 | 394 | 392 | 0 | – | |
| PANTHER | 3 | 394 | 392 | 0 | – | |
| PRINTS | 64 | 72 | 9 | 4.90E-24 | ||
| SUPERFAMILY | 68 | 395 | 328 | 1.22E-80 | ||
| Gene3D | 76 | 395 | 320 | 8.70E-97 | ||
| TMHMM | 86 | 108 | 23 | – | – | |
| Phobius | 88 | 112 | 25 | – | – | |
| Phobius | 113 | 132 | 20 | – | – | |
| Phobius | 133 | 161 | 29 | – | – | |
| TMHMM | 136 | 158 | 23 | – | – | |
| Pfam | 146 | 506 | 361 | 8.00E-78 | ||
| PRINTS | 159 | 176 | 18 | 1.90E-40 | ||
| Phobius | 162 | 180 | 19 | – | – | |
| TMHMM | 179 | 201 | 23 | – | – | |
| Phobius | 181 | 202 | 22 | – | – | |
| PRINTS | 190 | 209 | 20 | 1.90E-40 | ||
| Phobius | 203 | 247 | 45 | – | – | |
| Phobius | 248 | 272 | 25 | – | – | |
| TMHMM | 248 | 270 | 23 | – | – | |
| PRINTS | 254 | 273 | 20 | 1.90E-40 | ||
| Phobius | 273 | 277 | 5 | – | – | |
| PRINTS | 275 | 283 | 9 | 4.90E-24 | ||
| Phobius | 278 | 298 | 21 | – | – | |
| TMHMM | 282 | 304 | 23 | – | – | |
| PRINTS | 289 | 299 | 11 | 4.90E-24 | ||
| Phobius | 299 | 309 | 11 | – | – | |
| PRINTS | 307 | 314 | 8 | 4.90E-24 | ||
| Phobius | 310 | 329 | 20 | – | – | |
| Phobius | 330 | 334 | 5 | – | – | |
| TMHMM | 333 | 355 | 23 | – | – | |
| Phobius | 335 | 355 | 21 | – | – | |
| Phobius | 356 | 374 | 19 | – | – | |
| Phobius | 375 | 396 | 22 | – | – | |
| TMHMM | 375 | 394 | 20 | – | – | |
| Phobius | 397 | 462 | 66 | – | – | |
| PANTHER | 426 | 508 | 83 | 0 | – | |
| PANTHER | 426 | 508 | 83 | 0 | – | |
| PRINTS | 434 | 450 | 17 | 4.90E-24 | ||
| Gene3D | 439 | 506 | 68 | 8.70E-97 | ||
| SUPERFAMILY | 439 | 505 | 67 | 1.22E-80 | ||
| TMHMM | 460 | 482 | 23 | – | – | |
| Phobius | 463 | 492 | 30 | – | – | |
| PRINTS | 482 | 502 | 21 | 1.90E-40 | ||
| TMHMM | 484 | 503 | 20 | – | – | |
| Phobius | 493 | 510 | 18 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Voltage-gated chloride channel activity | Enables the transmembrane transfer of a chloride ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded. | ||
| Biological process | Chloride transport | The directed movement of chloride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v3834400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3834400.1, powered by CORGI.
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