Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002251
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 25 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.714s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0055669.1
n.a. PREDICTED: chloride channel protein CLC-b-like [Glycine max] gi|356571521|ref|XP_003553925.1| chr0 17999399 18004092 +
2 domain predictions
3 GO terms
Lj0g3v0199579.1
n.a. PREDICTED: chloride channel protein CLC-c-like [Cicer arietinum] gi|502126612|ref|XP_004499372.1| chr0 98001372 98004834 -
2 domain predictions
3 GO terms
Lj0g3v0205459.1
n.a. Chloride channel protein CLC-d [Medicago truncatula] gi|357480817|ref|XP_003610694.1| chr0 102208401 102212015 -
2 domain predictions
3 GO terms
Lj1g3v3834400.1
n.a. PREDICTED: chloride channel protein CLC-b-like [Cicer arietinum] gi|502164637|ref|XP_004513192.1| chr1 43764976 43768491 -
2 domain predictions
3 GO terms
Lj2g3v0536880.1
n.a. PREDICTED: chloride channel protein CLC-c-like isoform X1 [Cicer arietinum] gi|502162871|ref|XP_004512643.1| chr2 7287777 7295930 -
2 domain predictions
3 GO terms
Lj4g3v0000060.1
n.a. PREDICTED: chloride channel protein CLC-c-like [Cicer arietinum] gi|502126612|ref|XP_004499372.1| chr4 52608 56070 +
2 domain predictions
3 GO terms
Lj4g3v1893220.1
n.a. Cl-channel clc-7 [Populus trichocarpa] gi|224120342|ref|XP_002331024.1| chr4 26877774 26883645 -
2 domain predictions
3 GO terms
Lj6g3v2006990.1
n.a. Chloride channel protein CLC-c [Medicago truncatula] gi|357445225|ref|XP_003592890.1| chr6 23656940 23661597 +
2 domain predictions
3 GO terms
LotjaGi1g1v0623400.1
n.a. Chloride channel protein; TAIR: AT3G27170.1 chloride channel B; Swiss-Prot: sp|P92941|CLCA_ARATH Chloride channel protein CLC-a; TrEMBL-Plants: tr|A0A072TXX8|A0A072TXX8_MEDTR Chloride channel protein; Found in the gene: LotjaGi1g1v0623400 LjG1.1_chr1 117067421 117076012 -
2 domain predictions
3 GO terms
LotjaGi1g1v0623400.2
n.a. Chloride channel protein; TAIR: AT3G27170.1 chloride channel B; Swiss-Prot: sp|P92941|CLCA_ARATH Chloride channel protein CLC-a; TrEMBL-Plants: tr|I1N7R2|I1N7R2_SOYBN Chloride channel protein; Found in the gene: LotjaGi1g1v0623400 LjG1.1_chr1 117071407 117075755 -
2 domain predictions
3 GO terms
LotjaGi2g1v0168400.1
n.a. Chloride channel protein; TAIR: AT5G49890.1 chloride channel C; Swiss-Prot: sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c; TrEMBL-Plants: tr|G7KPA0|G7KPA0_MEDTR Chloride channel protein; Found in the gene: LotjaGi2g1v0168400 LjG1.1_chr2 58035182 58044019 -
2 domain predictions
3 GO terms
LotjaGi2g1v0168400.2
n.a. Chloride channel protein; TAIR: AT5G49890.1 chloride channel C; Swiss-Prot: sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c; TrEMBL-Plants: tr|G7KPA0|G7KPA0_MEDTR Chloride channel protein; Found in the gene: LotjaGi2g1v0168400 LjG1.1_chr2 58036142 58040743 -
2 domain predictions
3 GO terms
LotjaGi2g1v0168400.3
n.a. Chloride channel protein; TAIR: AT5G49890.1 chloride channel C; Swiss-Prot: sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c; TrEMBL-Plants: tr|G7KPA0|G7KPA0_MEDTR Chloride channel protein; Found in the gene: LotjaGi2g1v0168400 LjG1.1_chr2 58036142 58042945 -
2 domain predictions
3 GO terms
LotjaGi2g1v0168400.4
n.a. Chloride channel protein; TAIR: AT5G49890.1 chloride channel C; Swiss-Prot: sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c; TrEMBL-Plants: tr|G7KPA0|G7KPA0_MEDTR Chloride channel protein; Found in the gene: LotjaGi2g1v0168400 LjG1.1_chr2 58036142 58042972 -
2 domain predictions
3 GO terms
LotjaGi2g1v0168400.5
n.a. Chloride channel protein; TAIR: AT5G49890.1 chloride channel C; Swiss-Prot: sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c; TrEMBL-Plants: tr|G7KPA0|G7KPA0_MEDTR Chloride channel protein; Found in the gene: LotjaGi2g1v0168400 LjG1.1_chr2 58036142 58042972 -
2 domain predictions
3 GO terms
LotjaGi2g1v0456400.1
n.a. Chloride channel protein; TAIR: AT5G26240.1 chloride channel D; Swiss-Prot: sp|P92943|CLCD_ARATH Chloride channel protein CLC-d; TrEMBL-Plants: tr|I1JAU5|I1JAU5_SOYBN Chloride channel protein; Found in the gene: LotjaGi2g1v0456400 LjG1.1_chr2 94949847 94960370 -
2 domain predictions
3 GO terms
LotjaGi2g1v0456400.2
n.a. Chloride channel protein; TAIR: AT5G26240.1 chloride channel D; Swiss-Prot: sp|P92943|CLCD_ARATH Chloride channel protein CLC-d; TrEMBL-Plants: tr|K7K5J8|K7K5J8_SOYBN Chloride channel protein; Found in the gene: LotjaGi2g1v0456400 LjG1.1_chr2 94949847 94960370 -
2 domain predictions
3 GO terms
LotjaGi2g1v0456400.3
n.a. Chloride channel protein; TAIR: AT5G26240.1 chloride channel D; Swiss-Prot: sp|P92943|CLCD_ARATH Chloride channel protein CLC-d; TrEMBL-Plants: tr|A0A067G541|A0A067G541_CITSI Chloride channel protein; Found in the gene: LotjaGi2g1v0456400 LjG1.1_chr2 94951360 94959868 -
2 domain predictions
3 GO terms
LotjaGi2g1v0456400.4
n.a. Chloride channel protein; TAIR: AT5G26240.1 chloride channel D; Swiss-Prot: sp|P92943|CLCD_ARATH Chloride channel protein CLC-d; TrEMBL-Plants: tr|I1JAU5|I1JAU5_SOYBN Chloride channel protein; Found in the gene: LotjaGi2g1v0456400 LjG1.1_chr2 94951403 94959868 -
2 domain predictions
3 GO terms
LotjaGi2g1v0456400.5
n.a. Chloride channel protein; TAIR: AT5G26240.1 chloride channel D; Swiss-Prot: sp|P92943|CLCD_ARATH Chloride channel protein CLC-d; TrEMBL-Plants: tr|I1JAU5|I1JAU5_SOYBN Chloride channel protein; Found in the gene: LotjaGi2g1v0456400 LjG1.1_chr2 94951416 94959868 -
2 domain predictions
3 GO terms
LotjaGi2g1v0456400.6
n.a. Chloride channel protein; TAIR: AT5G26240.1 chloride channel D; Swiss-Prot: sp|P92943|CLCD_ARATH Chloride channel protein CLC-d; TrEMBL-Plants: tr|I1JAU5|I1JAU5_SOYBN Chloride channel protein; Found in the gene: LotjaGi2g1v0456400 LjG1.1_chr2 94951416 94959868 -
2 domain predictions
3 GO terms
LotjaGi4g1v0001100.1
n.a. Chloride channel protein; TAIR: AT5G49890.1 chloride channel C; Swiss-Prot: sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c; TrEMBL-Plants: tr|A0A072UTT7|A0A072UTT7_MEDTR Chloride channel protein; Found in the gene: LotjaGi4g1v0001100 LjG1.1_chr4 222825 227040 +
2 domain predictions
3 GO terms
LotjaGi4g1v0277500.1
n.a. Chloride channel protein; TAIR: AT5G33280.1 Voltage-gated chloride channel family protein; Swiss-Prot: sp|P60300|CLCG_ARATH Putative chloride channel-like protein CLC-g; TrEMBL-Plants: tr|G7JFF4|G7JFF4_MEDTR Chloride channel protein; Found in the gene: LotjaGi4g1v0277500 LjG1.1_chr4 64747539 64753650 -
2 domain predictions
3 GO terms
LotjaGi6g1v0328900.1
n.a. Chloride channel protein; TAIR: AT5G49890.1 chloride channel C; Swiss-Prot: sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c; TrEMBL-Plants: tr|Q1SKZ4|Q1SKZ4_MEDTR Chloride channel protein; Found in the gene: LotjaGi6g1v0328900 LjG1.1_chr6 64376129 64381238 +
2 domain predictions
3 GO terms
LotjaGi6g1v0328900.2
n.a. Chloride channel protein; TAIR: AT5G49890.1 chloride channel C; Swiss-Prot: sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c; TrEMBL-Plants: tr|Q1SKZ4|Q1SKZ4_MEDTR Chloride channel protein; Found in the gene: LotjaGi6g1v0328900 LjG1.1_chr6 64376129 64381304 +
2 domain predictions
3 GO terms