Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PR01120

Source: PRINTS

Description

Plant CLC chloride channel signature

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005247
Molecular function Voltage-gated chloride channel activity Enables the transmembrane transfer of a chloride ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.
Subterm of
GO:0006821
Biological process Chloride transport The directed movement of chloride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Subterm of
GO:0016020
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Subterm of

Associated Lotus transcripts 25

Transcript Name Description Predicted domains Domain count
Lj0g3v0055669.1
– PREDICTED: chloride channel protein CLC-b-like [Glycine max] gi|356571521|ref|XP_003553925.1|
Domains
22
Lj0g3v0199579.1
– PREDICTED: chloride channel protein CLC-c-like [Cicer arietinum] gi|502126612|ref|XP_004499372.1|
Domains
21
Lj0g3v0205459.1
– Chloride channel protein CLC-d [Medicago truncatula] gi|357480817|ref|XP_003610694.1|
Domains
14
Lj1g3v3834400.1
– PREDICTED: chloride channel protein CLC-b-like [Cicer arietinum] gi|502164637|ref|XP_004513192.1|
Domains
14
Lj2g3v0536880.1
– PREDICTED: chloride channel protein CLC-c-like isoform X1 [Cicer arietinum] gi|502162871|ref|XP_004512643.1|
Domains
22
Lj4g3v0000060.1
– PREDICTED: chloride channel protein CLC-c-like [Cicer arietinum] gi|502126612|ref|XP_004499372.1|
Domains
21
Lj4g3v1893220.1
– Cl-channel clc-7 [Populus trichocarpa] gi|224120342|ref|XP_002331024.1|
Domains
21
Lj6g3v2006990.1
– Chloride channel protein CLC-c [Medicago truncatula] gi|357445225|ref|XP_003592890.1|
Domains
22
LotjaGi1g1v0623400.1
– Chloride channel protein; TAIR: AT3G27170.1 chloride channel B; Swiss-Prot: sp|P92941|CLCA_ARATH Chloride channel protein CLC-a; TrEMBL-Plants: tr|A0A072TXX8|A0A072TXX8_MEDTR Chloride channel protein; Found in the gene: LotjaGi1g1v0623400
Domains
21
LotjaGi1g1v0623400.2
– Chloride channel protein; TAIR: AT3G27170.1 chloride channel B; Swiss-Prot: sp|P92941|CLCA_ARATH Chloride channel protein CLC-a; TrEMBL-Plants: tr|I1N7R2|I1N7R2_SOYBN Chloride channel protein; Found in the gene: LotjaGi1g1v0623400
Domains
22
LotjaGi2g1v0168400.1
– Chloride channel protein; TAIR: AT5G49890.1 chloride channel C; Swiss-Prot: sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c; TrEMBL-Plants: tr|G7KPA0|G7KPA0_MEDTR Chloride channel protein; Found in the gene: LotjaGi2g1v0168400
Domains
22
LotjaGi2g1v0168400.2
– Chloride channel protein; TAIR: AT5G49890.1 chloride channel C; Swiss-Prot: sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c; TrEMBL-Plants: tr|G7KPA0|G7KPA0_MEDTR Chloride channel protein; Found in the gene: LotjaGi2g1v0168400
Domains
20
LotjaGi2g1v0168400.3
– Chloride channel protein; TAIR: AT5G49890.1 chloride channel C; Swiss-Prot: sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c; TrEMBL-Plants: tr|G7KPA0|G7KPA0_MEDTR Chloride channel protein; Found in the gene: LotjaGi2g1v0168400
Domains
19
LotjaGi2g1v0168400.4
– Chloride channel protein; TAIR: AT5G49890.1 chloride channel C; Swiss-Prot: sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c; TrEMBL-Plants: tr|G7KPA0|G7KPA0_MEDTR Chloride channel protein; Found in the gene: LotjaGi2g1v0168400
Domains
21
LotjaGi2g1v0168400.5
– Chloride channel protein; TAIR: AT5G49890.1 chloride channel C; Swiss-Prot: sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c; TrEMBL-Plants: tr|G7KPA0|G7KPA0_MEDTR Chloride channel protein; Found in the gene: LotjaGi2g1v0168400
Domains
22
LotjaGi2g1v0456400.1
– Chloride channel protein; TAIR: AT5G26240.1 chloride channel D; Swiss-Prot: sp|P92943|CLCD_ARATH Chloride channel protein CLC-d; TrEMBL-Plants: tr|I1JAU5|I1JAU5_SOYBN Chloride channel protein; Found in the gene: LotjaGi2g1v0456400
Domains
22
LotjaGi2g1v0456400.2
– Chloride channel protein; TAIR: AT5G26240.1 chloride channel D; Swiss-Prot: sp|P92943|CLCD_ARATH Chloride channel protein CLC-d; TrEMBL-Plants: tr|K7K5J8|K7K5J8_SOYBN Chloride channel protein; Found in the gene: LotjaGi2g1v0456400
Domains
22
LotjaGi2g1v0456400.3
– Chloride channel protein; TAIR: AT5G26240.1 chloride channel D; Swiss-Prot: sp|P92943|CLCD_ARATH Chloride channel protein CLC-d; TrEMBL-Plants: tr|A0A067G541|A0A067G541_CITSI Chloride channel protein; Found in the gene: LotjaGi2g1v0456400
Domains
22
LotjaGi2g1v0456400.4
– Chloride channel protein; TAIR: AT5G26240.1 chloride channel D; Swiss-Prot: sp|P92943|CLCD_ARATH Chloride channel protein CLC-d; TrEMBL-Plants: tr|I1JAU5|I1JAU5_SOYBN Chloride channel protein; Found in the gene: LotjaGi2g1v0456400
Domains
22
LotjaGi2g1v0456400.5
– Chloride channel protein; TAIR: AT5G26240.1 chloride channel D; Swiss-Prot: sp|P92943|CLCD_ARATH Chloride channel protein CLC-d; TrEMBL-Plants: tr|I1JAU5|I1JAU5_SOYBN Chloride channel protein; Found in the gene: LotjaGi2g1v0456400
Domains
22
LotjaGi2g1v0456400.6
– Chloride channel protein; TAIR: AT5G26240.1 chloride channel D; Swiss-Prot: sp|P92943|CLCD_ARATH Chloride channel protein CLC-d; TrEMBL-Plants: tr|I1JAU5|I1JAU5_SOYBN Chloride channel protein; Found in the gene: LotjaGi2g1v0456400
Domains
22
LotjaGi4g1v0001100.1
– Chloride channel protein; TAIR: AT5G49890.1 chloride channel C; Swiss-Prot: sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c; TrEMBL-Plants: tr|A0A072UTT7|A0A072UTT7_MEDTR Chloride channel protein; Found in the gene: LotjaGi4g1v0001100
Domains
21
LotjaGi4g1v0277500.1
– Chloride channel protein; TAIR: AT5G33280.1 Voltage-gated chloride channel family protein; Swiss-Prot: sp|P60300|CLCG_ARATH Putative chloride channel-like protein CLC-g; TrEMBL-Plants: tr|G7JFF4|G7JFF4_MEDTR Chloride channel protein; Found in the gene: LotjaGi4g1v0277500
Domains
20
LotjaGi6g1v0328900.1
– Chloride channel protein; TAIR: AT5G49890.1 chloride channel C; Swiss-Prot: sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c; TrEMBL-Plants: tr|Q1SKZ4|Q1SKZ4_MEDTR Chloride channel protein; Found in the gene: LotjaGi6g1v0328900
Domains
22
LotjaGi6g1v0328900.2
– Chloride channel protein; TAIR: AT5G49890.1 chloride channel C; Swiss-Prot: sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c; TrEMBL-Plants: tr|Q1SKZ4|Q1SKZ4_MEDTR Chloride channel protein; Found in the gene: LotjaGi6g1v0328900
Domains
22

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd04591 CDD 1 4.00