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Lj1g3v3975340.1

Overview

Field Value
Gene ID Lj1g3v3975340
Transcript ID Lj1g3v3975340.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: importin-5-like isoform X2 [Cicer arietinum] gi|502107149|ref|XP_004493173.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10527
1 709 709 0 –
PANTHER
PTHR10527:SF29
1 709 709 0 –
SUPERFAMILY
SSF48371
13 648 636 5.50E-123
IPR016024
Gene3D
G3DSA:1.25.10.10
16 601 586 1.00E-114
IPR011989
SMART
SM01349
365 606 242 2.50E-15 –
Pfam
PF13646
378 481 104 1.50E-07 –
ProSiteProfiles
PS50077
416 454 39 9.73
IPR021133
CDD
cd00020
458 561 104 1.65E-04 –
Pfam
PF05004
482 621 140 2.50E-06
IPR007701
Gene3D
G3DSA:1.25.10.10
602 708 107 4.40E-09
IPR011989
SUPERFAMILY
SSF48371
684 708 25 5.50E-123
IPR016024

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj1g3v3975340.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v3975340.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.