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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3975580 |
| Transcript ID | Lj1g3v3975580.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Ankyrin repeat domain-containing protein [Medicago truncatula] gi|357508731|ref|XP_003624654.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 543 | 538 | 0 | – | |
| PANTHER | 6 | 543 | 538 | 0 | – | |
| SMART | 25 | 58 | 34 | 1800 | ||
| CDD | 30 | 136 | 107 | 2.63E-22 | – | |
| SUPERFAMILY | 39 | 136 | 98 | 7.93E-22 | ||
| ProSiteProfiles | 40 | 128 | 89 | 26.045 | ||
| Gene3D | 40 | 136 | 97 | 9.00E-24 | ||
| Pfam | 41 | 127 | 87 | 3.90E-11 | ||
| ProSiteProfiles | 62 | 94 | 33 | 13.544 | ||
| SMART | 62 | 91 | 30 | 2.40E-04 | ||
| ProSiteProfiles | 96 | 128 | 33 | 11.381 | ||
| SMART | 96 | 125 | 30 | 0.065 | ||
| ProSiteProfiles | 154 | 205 | 52 | 13.318 | ||
| SUPERFAMILY | 154 | 431 | 278 | 4.05E-64 | ||
| Gene3D | 154 | 431 | 278 | 4.20E-71 | ||
| Pfam | 155 | 202 | 48 | 5.90E-09 | ||
| PRINTS | 155 | 171 | 17 | 5.60E-14 | ||
| PRINTS | 189 | 202 | 14 | 5.60E-14 | ||
| ProSiteProfiles | 206 | 264 | 59 | 12.856 | ||
| Pfam | 206 | 259 | 54 | 6.00E-08 | ||
| PRINTS | 208 | 224 | 17 | 5.60E-14 | ||
| Pfam | 265 | 312 | 48 | 5.10E-11 | ||
| ProSiteProfiles | 265 | 315 | 51 | 15.147 | ||
| PRINTS | 265 | 281 | 17 | 5.60E-14 | ||
| PRINTS | 302 | 318 | 17 | 5.60E-14 | ||
| Pfam | 316 | 366 | 51 | 5.70E-12 | ||
| ProSiteProfiles | 316 | 369 | 54 | 16.212 | ||
| PRINTS | 318 | 332 | 15 | 5.60E-14 | ||
| ProSiteProfiles | 370 | 425 | 56 | 11.73 | ||
| SUPERFAMILY | 404 | 507 | 104 | 3.40E-13 | ||
| PRINTS | 415 | 433 | 19 | 5.60E-14 | ||
| PANTHER | 562 | 847 | 286 | 0 | – | |
| PANTHER | 562 | 847 | 286 | 0 | – | |
| CDD | 585 | 614 | 30 | 0.00121946 | – | |
| MobiDBLite | 760 | 797 | 38 | – | – | |
| Gene3D | 849 | 869 | 21 | 9.00E-24 | ||
| MobiDBLite | 887 | 912 | 26 | – | – | |
| MobiDBLite | 961 | 1051 | 91 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v3975580.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3975580.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.