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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3975850 |
| Transcript ID | Lj1g3v3975850.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ankyrin repeat and protein kinase domain-containing protein 1-like [Fragaria vesca subsp]. vesca] gi|470103946|ref|XP_004288386.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 2 | 150 | 149 | 1.70E-16 | ||
| Gene3D | 3 | 115 | 113 | 5.70E-14 | ||
| ProSiteProfiles | 4 | 135 | 132 | 14.581 | ||
| Pfam | 5 | 110 | 106 | 8.90E-07 | ||
| PANTHER | 34 | 362 | 329 | 1.40E-131 | – | |
| PANTHER | 34 | 362 | 329 | 1.40E-131 | – | |
| Gene3D | 136 | 370 | 235 | 1.30E-55 | ||
| Pfam | 154 | 242 | 89 | 4.20E-07 | ||
| SUPERFAMILY | 165 | 501 | 337 | 2.65E-69 | ||
| CDD | 167 | 303 | 137 | 8.47E-31 | – | |
| ProSiteProfiles | 172 | 204 | 33 | 10.499 | ||
| ProSiteProfiles | 172 | 501 | 330 | 82.026 | ||
| SMART | 172 | 201 | 30 | 6.50E-04 | ||
| ProSiteProfiles | 216 | 248 | 33 | 8.523 | ||
| SMART | 216 | 245 | 30 | 220 | ||
| ProSiteProfiles | 249 | 281 | 33 | 12.369 | ||
| SMART | 249 | 278 | 30 | 0.0084 | ||
| CDD | 253 | 369 | 117 | 2.39E-34 | – | |
| Pfam | 255 | 347 | 93 | 7.20E-20 | ||
| SMART | 282 | 311 | 30 | 2.60E-05 | ||
| ProSiteProfiles | 282 | 314 | 33 | 13.063 | ||
| SMART | 316 | 345 | 30 | 2.80E-05 | ||
| ProSiteProfiles | 316 | 348 | 33 | 14.132 | ||
| PRINTS | 317 | 332 | 16 | 6.20E-06 | ||
| SMART | 349 | 378 | 30 | 2000 | ||
| Gene3D | 375 | 448 | 74 | 8.80E-25 | ||
| CDD | 375 | 490 | 116 | 4.11E-32 | – | |
| Pfam | 375 | 466 | 92 | 1.40E-17 | ||
| PANTHER | 384 | 532 | 149 | 1.40E-131 | – | |
| PANTHER | 384 | 532 | 149 | 1.40E-131 | – | |
| ProSiteProfiles | 403 | 435 | 33 | 14.506 | ||
| SMART | 403 | 432 | 30 | 1.50E-05 | ||
| PRINTS | 419 | 433 | 15 | 6.20E-06 | ||
| SMART | 436 | 465 | 30 | 6.60E-06 | ||
| ProSiteProfiles | 436 | 468 | 33 | 13.384 | ||
| Gene3D | 449 | 501 | 53 | 2.50E-13 | ||
| SMART | 469 | 498 | 30 | 1600 | ||
| ProSiteProfiles | 469 | 501 | 33 | 8.79 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v3975850.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3975850.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.