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IPR000535 is a Major sperm protein (MSP) domain.
<p>Nematode sperm are unusual amoeboid cells in which motility is not based on actin, but instead on the major sperm protein (MSP). MSP is a dimeric molecule that polymerises to form non-polar filaments constructed from two helical subfilaments that wind round one another. The filaments then assemble into larger macromolecular assemblies called fibre complexes. MSP is a small (~14kDa) basic protein typically encoded by a multigene family of up to 28 members [[cite:PUB00003372], [cite:PUB00016286], [cite:PUB00018203], [cite:PUB00018204]]. An about 120-amino acid domain similar to MSP has been found in other proteins, including: </p> <ul> <li>Animal Vesicle-Associated Membrane Protein-associated (VAMP-associated) protein family of 33kDa (VAP33). VAP33 is required for neurotransmitter release. It binds to the v-SNARE synaptobrevin/VAMP which is associated with vesicle fusion. VAP33 has a two-domain structure with its N terminus being highly homologous to MSP, whereas its C terminus is based on a putative α-helical coiled-coil combined with an extremely hydrophobic membrane-attachment region [[cite:PUB00018205]].</li> <li>Nicotiana plumbaginifolia VAP27, a VAP33 homologue. It interacts with the resistance protein Cf9 [[cite:PUB00018206]].</li> <li>Yeast inositol regulator SCS2, a VAP33 homologue. It is C-terminally anchored to the endoplasmic reticulum [[cite:PUB00018207]].</li> </ul> <p>The MSP polypeptide chain has an immunoglobulin-like fold based on a seven-stranded β sandwich measuring approximately 15 A x 20 A x 45 A and having opposing three-stranded and four-stranded β sheets [[cite:PUB00003372]].</p> <p>This entry represents the MSP domain.</p>
This description is obtained from EB-eye REST.
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | Hermes [Medicago truncatula] gi|261824308|gb|ACX94227.1| | 18 | ||
– | PREDICTED: ankyrin repeat and protein kinase domain-containing protein 1-like [Fragaria vesca subsp]. vesca] gi|470103946|ref|XP_004288386.1| | 18 | ||
– | PREDICTED: vesicle-associated protein 2-1-like [Cicer arietinum] gi|502160402|ref|XP_004511733.1| | 15 | ||
– | PREDICTED: vesicle-associated protein 2-1-like [Cicer arietinum] gi|502160402|ref|XP_004511733.1| | 14 | ||
– | PREDICTED: vesicle-associated protein 1-2-like [Glycine max] gi|356495613|ref|XP_003516669.1| | 16 | ||
– | Disease resistance-like protein GS0-1 [Medicago truncatula] gi|357494437|ref|XP_003617507.1| | 15 | ||
– | PREDICTED: vesicle-associated protein 1-1-like [Fragaria vesca subsp]. vesca] gi|470126951|ref|XP_004299443.1| | 9 | ||
– | PREDICTED: vesicle-associated protein 1-2-like [Glycine max] gi|356495613|ref|XP_003516669.1| | 14 | ||
– | PREDICTED: ankyrin-2-like [Cicer arietinum] gi|502097529|ref|XP_004491016.1| | 18 | ||
– | PREDICTED: vesicle-associated protein 1-2-like [Glycine max] gi|356496332|ref|XP_003517022.1| | 11 | ||
– | PREDICTED: vesicle-associated protein 1-2-like [Glycine max] gi|356496332|ref|XP_003517022.1| | 15 | ||
– | PREDICTED: vesicle-associated protein 4-2-like [Glycine max] gi|356543790|ref|XP_003540343.1| | 10 | ||
– | PREDICTED: vesicle-associated protein 4-2-like [Glycine max] gi|356517568|ref|XP_003527459.1| | 10 | ||
– | Vesicle-associated membrane protein-associated protein A [Medicago truncatula] gi|357475961|ref|XP_003608266.1| | 10 | ||
– | Vesicle-associated membrane protein-associated protein SCS2 [Medicago truncatula] gi|357478585|ref|XP_003609578.1| | 11 | ||
– | Vesicle-associated membrane protein-associated protein SCS2 [Medicago truncatula] gi|357478585|ref|XP_003609578.1| | 11 | ||
– | PREDICTED: vesicle-associated protein 2-2-like [Glycine max] gi|356574914|ref|XP_003555588.1| | 10 | ||
– | PREDICTED: ankyrin-2-like [Cicer arietinum] gi|502118004|ref|XP_004496053.1| | 17 | ||
– | PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 12-like isoform X2 [Cicer arietinum] gi|502126642|ref|XP_004499384.1| | 19 | ||
– | Ankyrin repeat-containing protein, putative; TAIR: AT2G03430.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q08DV6|ASB3_BOVIN Ankyrin repeat and SOCS box protein 3; TrEMBL-Plants: tr|I1JIE8|I1JIE8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0074700 | 19 | ||
– | Ankyrin repeat-containing protein; TAIR: AT5G13530.1 protein kinases;ubiquitin-protein ligase; Swiss-Prot: sp|Q9ULJ7|ANR50_HUMAN Ankyrin repeat domain-containing protein 50; TrEMBL-Plants: tr|A0A1J7G1T5|A0A1J7G1T5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0646300 | 21 | ||
– | Ankyrin repeat-containing protein; TAIR: AT5G14230.1 ankyrin; Swiss-Prot: sp|Q01484|ANK2_HUMAN Ankyrin-2; TrEMBL-Plants: tr|D3J162|D3J162_MEDTR Ankyrin repeat RF-like protein, putative; Found in the gene: LotjaGi2g1v0091200 | 19 | ||
– | Vesicle-associated protein 1-1; TAIR: AT5G47180.1 Plant VAMP (vesicle-associated membrane protein) family protein; Swiss-Prot: sp|Q9LVU1|VAP21_ARATH Vesicle-associated protein 2-1; TrEMBL-Plants: tr|I3SMW1|I3SMW1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0419800 | 16 | ||
– | Vesicle-associated protein 1-1; TAIR: AT5G47180.1 Plant VAMP (vesicle-associated membrane protein) family protein; Swiss-Prot: sp|Q9LVU1|VAP21_ARATH Vesicle-associated protein 2-1; TrEMBL-Plants: tr|I3SMW1|I3SMW1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0419800 | 17 | ||
– | Vesicle-associated 1-1-like protein; TAIR: AT2G45140.1 plant VAP homolog 12; Swiss-Prot: sp|Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2; TrEMBL-Plants: tr|I3S2M8|I3S2M8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0424200 | 17 | ||
– | Vesicle-associated 1-1-like protein; TAIR: AT2G45140.1 plant VAP homolog 12; Swiss-Prot: sp|Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2; TrEMBL-Plants: tr|I3SEQ0|I3SEQ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0424300 | 17 | ||
– | Vesicle-associated 1-1-like protein; TAIR: AT2G45140.1 plant VAP homolog 12; Swiss-Prot: sp|Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2; TrEMBL-Plants: tr|I3SEQ0|I3SEQ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0424300 | 15 | ||
– | Vesicle-associated 1-1-like protein; TAIR: AT2G45140.1 plant VAP homolog 12; Swiss-Prot: sp|Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2; TrEMBL-Plants: tr|I3SEQ0|I3SEQ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0424300 | 17 | ||
– | Vesicle-associated 1-1-like protein; TAIR: AT2G45140.1 plant VAP homolog 12; Swiss-Prot: sp|Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2; TrEMBL-Plants: tr|K7K3P5|K7K3P5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0206300 | 16 | ||
– | Vesicle-associated protein 4-2; TAIR: AT4G21450.1 PapD-like superfamily protein; Swiss-Prot: sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2; TrEMBL-Plants: tr|I3SHF4|I3SHF4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0439800 | 11 | ||
– | Vesicle-associated protein 4-2; TAIR: AT4G21450.1 PapD-like superfamily protein; Swiss-Prot: sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2; TrEMBL-Plants: tr|I3T8Y7|I3T8Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0459500 | 11 | ||
– | Vesicle-associated protein 4-2; TAIR: AT4G21450.1 PapD-like superfamily protein; Swiss-Prot: sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2; TrEMBL-Plants: tr|I3T8Y7|I3T8Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0459500 | 11 | ||
– | Vesicle-associated protein 4-2; TAIR: AT4G21450.1 PapD-like superfamily protein; Swiss-Prot: sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2; TrEMBL-Plants: tr|I3T8Y7|I3T8Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0459500 | 11 | ||
– | Vesicle-associated protein 4-2; TAIR: AT4G21450.1 PapD-like superfamily protein; Swiss-Prot: sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2; TrEMBL-Plants: tr|Q2HTV7|Q2HTV7_MEDTR Major sperm protein; Found in the gene: LotjaGi4g1v0048100 | 11 | ||
– | Vesicle-associated protein 4-2; TAIR: AT4G21450.1 PapD-like superfamily protein; Swiss-Prot: sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2; TrEMBL-Plants: tr|Q2HTV7|Q2HTV7_MEDTR Major sperm protein; Found in the gene: LotjaGi4g1v0048100 | 11 | ||
– | Vesicle-associated protein 1-2; TAIR: AT1G08820.1 vamp/synaptobrevin-associated protein 27-2; Swiss-Prot: sp|B9DHD7|VAP22_ARATH Vesicle-associated protein 2-2; TrEMBL-Plants: tr|C6THF6|C6THF6_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0346700 | 16 | ||
– | Vesicle-associated protein 1-2; TAIR: AT1G08820.1 vamp/synaptobrevin-associated protein 27-2; Swiss-Prot: sp|B9DHD7|VAP22_ARATH Vesicle-associated protein 2-2; TrEMBL-Plants: tr|A0A0R0EF48|A0A0R0EF48_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0217200 | 16 | ||
– | Ankyrin repeat-containing protein, putative; TAIR: AT5G20350.1 Ankyrin repeat family protein with DHHC zinc finger domain-containing protein; Swiss-Prot: sp|Q01484|ANK2_HUMAN Ankyrin-2; TrEMBL-Plants: tr|D3J163|D3J163_MEDTR Ankyrin repeat, PH and SEC7 domain secG-like protein; Found in the gene: LotjaGi5g1v0260800 | 18 | ||
– | Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT2G43900.1 Endonuclease/exonuclease/phosphatase family protein; Swiss-Prot: sp|O80560|IP5PC_ARATH Type I inositol polyphosphate 5-phosphatase 12; TrEMBL-Plants: tr|G7KJV0|G7KJV0_MEDTR Type I inositol-1,4,5-trisphosphate 5-phosphatase; Found in the gene: LotjaGi5g1v0329800 | 21 | ||
– | Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT1G05630.1 Endonuclease/exonuclease/phosphatase family protein; Swiss-Prot: sp|O80560|IP5PC_ARATH Type I inositol polyphosphate 5-phosphatase 12; TrEMBL-Plants: tr|A0A0S3RA92|A0A0S3RA92_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0329800 | 22 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 2.50 |