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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4103630 |
| Transcript ID | Lj1g3v4103630.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: queuine tRNA-ribosyltransferase-like [Glycine max] gi|356510157|ref|XP_003523806.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 54 | 428 | 375 | 2.90E-217 | – | |
| PANTHER | 54 | 428 | 375 | 2.90E-217 | – | |
| Gene3D | 55 | 424 | 370 | 3.50E-165 | ||
| SUPERFAMILY | 58 | 421 | 364 | 5.36E-141 | ||
| Hamap | 60 | 416 | 357 | 46.238 | ||
| TIGRFAM | 62 | 422 | 361 | 9.70E-129 | ||
| TIGRFAM | 62 | 422 | 361 | 1.80E-132 | ||
| Pfam | 185 | 418 | 234 | 7.30E-87 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | TRNA modification | The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically. | ||
| Molecular function | Queuine tRNA-ribosyltransferase activity | Catalysis of the reaction: tRNA guanine + queuine = tRNA queuine + guanine. | ||
| Molecular function | Transferase activity, transferring pentosyl groups | Catalysis of the transfer of a pentosyl group from one compound (donor) to another (acceptor). | ||
| Biological process | TRNA-guanine transglycosylation | The modification of a tRNA anticodon loop by replacing guanine with queuonine. Reaction is tRNA guanine + queuine = tRNA queuine + guanine. |
Expression pattern of Lj1g3v4103630.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4103630.1, powered by CORGI.
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