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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4106960 |
| Transcript ID | Lj1g3v4106960.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | UML [Lotus japonicus] gi|430804040|gb|AGA83304.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| TIGRFAM | 1 | 592 | 592 | 4.50E-161 | ||
| Phobius | 1 | 5 | 5 | – | – | |
| PANTHER | 2 | 287 | 286 | 0 | – | |
| PANTHER | 2 | 287 | 286 | 0 | – | |
| Phobius | 6 | 28 | 23 | – | – | |
| TMHMM | 7 | 26 | 20 | – | – | |
| Pfam | 9 | 587 | 579 | 1.20E-191 | ||
| Phobius | 29 | 39 | 11 | – | – | |
| Phobius | 40 | 59 | 20 | – | – | |
| TMHMM | 41 | 60 | 20 | – | – | |
| Phobius | 60 | 70 | 11 | – | – | |
| Phobius | 71 | 89 | 19 | – | – | |
| Phobius | 90 | 100 | 11 | – | – | |
| TMHMM | 98 | 120 | 23 | – | – | |
| Phobius | 101 | 120 | 20 | – | – | |
| Phobius | 121 | 131 | 11 | – | – | |
| TMHMM | 130 | 152 | 23 | – | – | |
| Phobius | 132 | 152 | 21 | – | – | |
| Phobius | 153 | 447 | 295 | – | – | |
| MobiDBLite | 213 | 235 | 23 | – | – | |
| PANTHER | 331 | 592 | 262 | 0 | – | |
| PANTHER | 331 | 592 | 262 | 0 | – | |
| MobiDBLite | 395 | 423 | 29 | – | – | |
| Phobius | 448 | 465 | 18 | – | – | |
| Phobius | 466 | 476 | 11 | – | – | |
| Phobius | 477 | 497 | 21 | – | – | |
| TMHMM | 477 | 499 | 23 | – | – | |
| Phobius | 498 | 508 | 11 | – | – | |
| Phobius | 509 | 531 | 23 | – | – | |
| TMHMM | 509 | 531 | 23 | – | – | |
| Phobius | 532 | 536 | 5 | – | – | |
| TMHMM | 536 | 558 | 23 | – | – | |
| Phobius | 537 | 558 | 22 | – | – | |
| Phobius | 559 | 569 | 11 | – | – | |
| TMHMM | 568 | 590 | 23 | – | – | |
| Phobius | 570 | 589 | 20 | – | – | |
| Phobius | 590 | 592 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v4106960.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4106960.1, powered by CORGI.
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