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IPR014024 is a Auxin efflux carrier, plant type.
<p>This entry is mostly composed of known or predicted PIN proteins from plants, though some homologous prokaryotic proteins are also included. The PIN proteins are components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [[cite:PUB00033872], [cite:PUB00033873]]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Auxin efflux carrier protein [Medicago truncatula] gi|25986775|gb|AAM55299.1| | 11 | ||
| – | Auxin efflux carrier protein [Medicago truncatula] gi|25986775|gb|AAM55299.1| | 11 | ||
| – | PREDICTED: probable auxin efflux carrier component 6-like [Glycine max] gi|356552773|ref|XP_003544737.1| | 10 | ||
| – | Auxin Efflux Carrier [Medicago truncatula] gi|357507711|ref|XP_003624144.1| | 10 | ||
| – | UML [Lotus japonicus] gi|430804040|gb|AGA83304.1| | 11 | ||
| – | PIN4b [Glycine max] gi|481044552|gb|AGJ95058.1| | 11 | ||
| – | PIN4b [Glycine max] gi|481044552|gb|AGJ95058.1| | 11 | ||
| – | PIN11 [Medicago truncatula] gi|481044534|gb|AGJ95049.1| | 11 | ||
| – | PREDICTED: auxin efflux carrier component 3-like [Cicer arietinum] gi|502143228|ref|XP_004505266.1| | 11 | ||
| – | PIN2a [Glycine max] gi|481044558|gb|AGJ95061.1| | 11 | ||
| – | PIN4b [Glycine max] gi|481044552|gb|AGJ95058.1| | 11 | ||
| – | PIN4b [Glycine max] gi|481044552|gb|AGJ95058.1| | 11 | ||
| – | Auxin efflux carrier component; TAIR: AT1G77110.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9SQH6|PIN6_ARATH Auxin efflux carrier component 6; TrEMBL-Plants: tr|I1MAE5|I1MAE5_SOYBN Auxin efflux carrier component; Found in the gene: LotjaGi1g1v0168600 | 11 | ||
| – | Auxin efflux carrier component; TAIR: AT5G16530.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9FFD0|PIN5_ARATH Auxin efflux carrier component 5; TrEMBL-Plants: tr|A0A0L9U3R1|A0A0L9U3R1_PHAAN Auxin efflux carrier component; Found in the gene: LotjaGi1g1v0484100 | 10 | ||
| – | Auxin efflux carrier component; TAIR: AT5G15100.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9LFP6|PIN8_ARATH Auxin efflux carrier component 8; TrEMBL-Plants: tr|Q5FV66|Q5FV66_MEDTR Auxin efflux carrier component; Found in the gene: LotjaGi1g1v0498200 | 11 | ||
| – | Auxin efflux carrier component; TAIR: AT5G15100.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9LFP6|PIN8_ARATH Auxin efflux carrier component 8; TrEMBL-Plants: tr|Q5FV66|Q5FV66_MEDTR Auxin efflux carrier component; Found in the gene: LotjaGi1g1v0498200 | 11 | ||
| – | Auxin efflux carrier component; TAIR: AT5G15100.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9LFP6|PIN8_ARATH Auxin efflux carrier component 8; TrEMBL-Plants: tr|Q5FV66|Q5FV66_MEDTR Auxin efflux carrier component; Found in the gene: LotjaGi1g1v0498200 | 11 | ||
| – | Auxin efflux carrier component; TAIR: AT1G73590.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q67UL3|PIN1C_ORYSJ Probable auxin efflux carrier component 1c; TrEMBL-Plants: tr|L0GC85|L0GC85_LOTJA Auxin efflux carrier component; Found in the gene: LotjaGi1g1v0661500 | 11 | ||
| – | Auxin efflux carrier component; TAIR: AT5G57090.2 Auxin efflux carrier family protein; Swiss-Prot: sp|Q67UL3|PIN1C_ORYSJ Probable auxin efflux carrier component 1c; TrEMBL-Plants: tr|M9WUK9|M9WUK9_SOYBN Auxin efflux carrier component; Found in the gene: LotjaGi1g1v0661500 | 10 | ||
| – | Auxin efflux carrier component; TAIR: AT1G70940.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9S7Z8|PIN3_ARATH Auxin efflux carrier component 3; TrEMBL-Plants: tr|B9X291|B9X291_PEA Auxin efflux carrier component; Found in the gene: LotjaGi2g1v0062600 | 11 | ||
| – | Auxin efflux carrier component; TAIR: AT1G70940.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9S7Z8|PIN3_ARATH Auxin efflux carrier component 3; TrEMBL-Plants: tr|B9X291|B9X291_PEA Auxin efflux carrier component; Found in the gene: LotjaGi2g1v0062600 | 11 | ||
| – | Auxin efflux carrier component; TAIR: AT2G01420.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q67UL3|PIN1C_ORYSJ Probable auxin efflux carrier component 1c; TrEMBL-Plants: tr|Q8GV75|Q8GV75_MEDTR Auxin efflux carrier component; Found in the gene: LotjaGi2g1v0062600 | 10 | ||
| – | Auxin efflux carrier component; TAIR: AT1G73590.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q5SMQ9|PIN1A_ORYSJ Auxin efflux carrier component 1a; TrEMBL-Plants: tr|M9WLU7|M9WLU7_SOYBN Auxin efflux carrier component; Found in the gene: LotjaGi2g1v0196800 | 11 | ||
| – | Auxin efflux carrier component; TAIR: AT5G57090.2 Auxin efflux carrier family protein; Swiss-Prot: sp|Q0IQA5|PIN1D_ORYSJ Probable auxin efflux carrier component 1d; TrEMBL-Plants: tr|V7C3I7|V7C3I7_PHAVU Auxin efflux carrier component; Found in the gene: LotjaGi2g1v0196800 | 10 | ||
| – | Auxin efflux carrier component; TAIR: AT5G15100.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9LFP6|PIN8_ARATH Auxin efflux carrier component 8; TrEMBL-Plants: tr|M9WUH6|M9WUH6_MEDTR Auxin efflux carrier component; Found in the gene: LotjaGi2g1v0256600 | 11 | ||
| – | Auxin efflux carrier component; TAIR: AT5G15100.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9LFP6|PIN8_ARATH Auxin efflux carrier component 8; TrEMBL-Plants: tr|M9WUH6|M9WUH6_MEDTR Auxin efflux carrier component; Found in the gene: LotjaGi2g1v0256600 | 11 | ||
| – | Auxin efflux carrier component; TAIR: AT5G15100.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9LFP6|PIN8_ARATH Auxin efflux carrier component 8; TrEMBL-Plants: tr|M9WUH6|M9WUH6_MEDTR Auxin efflux carrier component; Found in the gene: LotjaGi2g1v0256600 | 11 | ||
| – | Auxin efflux carrier component; TAIR: AT1G70940.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9S7Z8|PIN3_ARATH Auxin efflux carrier component 3; TrEMBL-Plants: tr|I1ND75|I1ND75_SOYBN Auxin efflux carrier component; Found in the gene: LotjaGi4g1v0078400 | 11 | ||
| – | Auxin efflux carrier component; TAIR: AT1G70940.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9S7Z8|PIN3_ARATH Auxin efflux carrier component 3; TrEMBL-Plants: tr|I1ND75|I1ND75_SOYBN Auxin efflux carrier component; Found in the gene: LotjaGi4g1v0078400 | 11 | ||
| – | Auxin efflux carrier component; TAIR: AT1G70940.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9S7Z8|PIN3_ARATH Auxin efflux carrier component 3; TrEMBL-Plants: tr|I1ND75|I1ND75_SOYBN Auxin efflux carrier component; Found in the gene: LotjaGi4g1v0078400 | 11 | ||
| – | Auxin efflux carrier component; TAIR: AT5G57090.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9LU77|PIN2_ARATH Auxin efflux carrier component 2; TrEMBL-Plants: tr|I1LVK8|I1LVK8_SOYBN Auxin efflux carrier component; Found in the gene: LotjaGi4g1v0307500 | 12 | ||
| – | Auxin efflux carrier component; TAIR: AT1G73590.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9C6B8|PINI_ARATH Auxin efflux carrier component 1; TrEMBL-Plants: tr|I3T0I6|I3T0I6_LOTJA Auxin efflux carrier component; Found in the gene: LotjaGi4g1v0464500 | 11 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 3.13 |