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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4140620 |
| Transcript ID | Lj1g3v4140620.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isoform X2 [Cicer arietinum] gi|502108147|ref|XP_004493398.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 23 | 23 | – | – | |
| MobiDBLite | 70 | 135 | 66 | – | – | |
| PANTHER | 156 | 593 | 438 | 6.10E-256 | – | |
| PANTHER | 156 | 593 | 438 | 6.10E-256 | – | |
| ProSiteProfiles | 240 | 274 | 35 | 8.955 | ||
| TIGRFAM | 242 | 274 | 33 | 3.50E-05 | ||
| Gene3D | 249 | 292 | 44 | 1.90E-04 | ||
| Pfam | 267 | 320 | 54 | 3.60E-05 | ||
| ProSiteProfiles | 309 | 343 | 35 | 8.111 | ||
| ProSiteProfiles | 344 | 378 | 35 | 7.388 | ||
| Gene3D | 382 | 537 | 156 | 1.90E-04 | ||
| ProSiteProfiles | 445 | 479 | 35 | 8.1 | ||
| Pfam | 450 | 477 | 28 | 0.11 | ||
| ProSiteProfiles | 480 | 514 | 35 | 7.18 | ||
| Pfam | 515 | 565 | 51 | 0.0019 | ||
| ProSiteProfiles | 519 | 553 | 35 | 8.089 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v4140620.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4140620.1, powered by CORGI.
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