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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4226890 |
| Transcript ID | Lj1g3v4226890.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DNA helicase INO80-like isoform 2 [Glycine max] gi|356572004|ref|XP_003554160.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 141 | 141 | 17.702 | ||
| PANTHER | 3 | 260 | 258 | 0 | – | |
| CDD | 3 | 123 | 121 | 7.75E-14 | – | |
| Pfam | 3 | 259 | 257 | 2.20E-53 | ||
| PANTHER | 3 | 260 | 258 | 0 | – | |
| SUPERFAMILY | 6 | 186 | 181 | 3.10E-42 | ||
| Gene3D | 8 | 138 | 131 | 9.10E-13 | ||
| SUPERFAMILY | 188 | 276 | 89 | 1.58E-66 | ||
| PANTHER | 483 | 507 | 25 | 0 | – | |
| PANTHER | 483 | 507 | 25 | 0 | – | |
| PANTHER | 565 | 735 | 171 | 0 | – | |
| PANTHER | 565 | 735 | 171 | 0 | – | |
| SUPERFAMILY | 566 | 755 | 190 | 1.58E-66 | ||
| Gene3D | 570 | 722 | 153 | 5.00E-24 | ||
| CDD | 571 | 695 | 125 | 5.43E-30 | – | |
| ProSiteProfiles | 578 | 762 | 185 | 18.65 | ||
| Pfam | 578 | 687 | 110 | 3.10E-17 | ||
| SMART | 604 | 687 | 84 | 9.20E-23 | ||
| MobiDBLite | 758 | 862 | 105 | – | – | |
| PANTHER | 777 | 796 | 20 | 0 | – | |
| PANTHER | 777 | 796 | 20 | 0 | – | |
| PANTHER | 833 | 848 | 16 | 0 | – | |
| PANTHER | 833 | 848 | 16 | 0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of Lj1g3v4226890.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4226890.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.