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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4276550 |
| Transcript ID | Lj1g3v4276550.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 356 | 356 | 5.30E-303 | – | |
| PANTHER | 1 | 356 | 356 | 5.30E-303 | – | |
| ProSiteProfiles | 44 | 78 | 35 | 9.405 | ||
| Pfam | 49 | 75 | 27 | 0.0088 | ||
| Gene3D | 51 | 105 | 55 | 9.00E-04 | ||
| TIGRFAM | 77 | 102 | 26 | 7.20E-04 | ||
| Pfam | 77 | 101 | 25 | 3.70E-04 | ||
| ProSiteProfiles | 79 | 110 | 32 | 5.36 | ||
| Gene3D | 143 | 222 | 80 | 9.00E-04 | ||
| ProSiteProfiles | 146 | 176 | 31 | 6.862 | ||
| Pfam | 177 | 224 | 48 | 5.50E-04 | ||
| ProSiteProfiles | 177 | 211 | 35 | 8.495 | ||
| TIGRFAM | 180 | 213 | 34 | 0.0011 | ||
| ProSiteProfiles | 213 | 243 | 31 | 7.169 | ||
| ProSiteProfiles | 249 | 283 | 35 | 8.166 | ||
| Pfam | 253 | 277 | 25 | 0.0097 | ||
| TIGRFAM | 253 | 276 | 24 | 0.0014 | ||
| Gene3D | 255 | 274 | 20 | 9.00E-04 | ||
| ProSiteProfiles | 315 | 349 | 35 | 6.895 | ||
| Pfam | 352 | 475 | 124 | 1.60E-37 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of Lj1g3v4276550.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4276550.1, powered by CORGI.
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