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Lj1g3v4404390.1

Overview

Field Value
Gene ID Lj1g3v4404390
Transcript ID Lj1g3v4404390.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2-like [Glycine max] gi|356500232|ref|XP_003518937.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27001
11 41 31 1.40E-220 –
PANTHER
PTHR27001:SF54
11 41 31 1.40E-220 –
MobiDBLite
mobidb-lite
17 36 20 – –
Gene3D
G3DSA:3.30.200.20
91 191 101 4.50E-23 –
SUPERFAMILY
SSF56112
96 385 290 3.28E-74
IPR011009
PANTHER
PTHR27001:SF54
100 397 298 1.40E-220 –
PANTHER
PTHR27001
100 397 298 1.40E-220 –
ProSiteProfiles
PS50011
116 389 274 34.435
IPR000719
SMART
SM00220
116 392 277 5.10E-32
IPR000719
Pfam
PF07714
119 384 266 1.90E-41
IPR001245
ProSitePatterns
PS00107
122 144 23 –
IPR017441
CDD
cd14066
122 387 266 6.49E-88 –
Gene3D
G3DSA:1.10.510.10
194 384 191 1.00E-42 –
ProSitePatterns
PS00108
237 249 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 11

Expression data

Expression pattern

Expression pattern of Lj1g3v4404390.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4404390.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.