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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4483400 |
| Transcript ID | Lj1g3v4483400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At2g01390-like [Cicer arietinum] gi|502138077|ref|XP_004503279.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 23 | 75 | 53 | – | – | |
| PANTHER | 61 | 302 | 242 | 2.30E-227 | – | |
| PANTHER | 61 | 302 | 242 | 2.30E-227 | – | |
| ProSiteProfiles | 142 | 176 | 35 | 10.775 | ||
| TIGRFAM | 144 | 177 | 34 | 1.50E-07 | ||
| Pfam | 144 | 174 | 31 | 1.70E-04 | ||
| Gene3D | 146 | 291 | 146 | 3.50E-04 | ||
| ProSiteProfiles | 177 | 211 | 35 | 12.682 | ||
| Pfam | 179 | 209 | 31 | 2.10E-07 | ||
| TIGRFAM | 179 | 213 | 35 | 3.40E-10 | ||
| Pfam | 211 | 257 | 47 | 1.10E-11 | ||
| ProSiteProfiles | 212 | 246 | 35 | 9.613 | ||
| TIGRFAM | 214 | 248 | 35 | 2.40E-05 | ||
| ProSiteProfiles | 247 | 281 | 35 | 10.961 | ||
| TIGRFAM | 249 | 282 | 34 | 4.20E-05 | ||
| Pfam | 270 | 314 | 45 | 0.0011 | ||
| ProSiteProfiles | 282 | 316 | 35 | 6.774 | ||
| PANTHER | 400 | 565 | 166 | 2.30E-227 | – | |
| PANTHER | 400 | 565 | 166 | 2.30E-227 | – | |
| ProSiteProfiles | 436 | 470 | 35 | 6.862 | ||
| Gene3D | 502 | 526 | 25 | 3.50E-04 | ||
| Pfam | 504 | 550 | 47 | 2.40E-09 | ||
| ProSiteProfiles | 504 | 538 | 35 | 10.961 | ||
| TIGRFAM | 507 | 538 | 32 | 3.10E-07 | ||
| ProSiteProfiles | 539 | 569 | 31 | 5.448 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v4483400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4483400.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.