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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0025840 |
| Transcript ID | Lj2g3v0025840.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 21 | 21 | 5 | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| PIRSF | 1 | 262 | 262 | 1.40E-94 | ||
| Phobius | 1 | 8 | 8 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| PANTHER | 6 | 250 | 245 | 8.80E-171 | – | |
| PANTHER | 6 | 250 | 245 | 8.80E-171 | ||
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 9 | 19 | 11 | – | – | |
| Phobius | 20 | 24 | 5 | – | – | |
| ProSiteProfiles | 24 | 245 | 222 | 41.101 | ||
| Phobius | 25 | 271 | 247 | – | – | |
| Gene3D | 26 | 246 | 221 | 2.70E-76 | ||
| SUPERFAMILY | 26 | 246 | 221 | 2.75E-76 | ||
| PRINTS | 26 | 38 | 13 | 8.80E-29 | ||
| SMART | 27 | 245 | 219 | 3.10E-102 | ||
| CDD | 29 | 244 | 216 | 2.58E-110 | – | |
| Pfam | 31 | 245 | 215 | 5.30E-78 | ||
| PRINTS | 74 | 85 | 12 | 8.80E-29 | ||
| PRINTS | 87 | 116 | 30 | 8.80E-29 | ||
| ProSitePatterns | 87 | 102 | 16 | – | ||
| PRINTS | 125 | 141 | 17 | 8.80E-29 | ||
| PRINTS | 235 | 244 | 10 | 8.80E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj2g3v0025840.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0025840.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.