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Lj2g3v0346240.1

Overview

Field Value
Gene ID Lj2g3v0346240
Transcript ID Lj2g3v0346240.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: U-box domain-containing protein 32-like [Cicer arietinum] gi|502119238|ref|XP_004496550.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
78 103 26 – –
Coils
Coil
130 150 21 – –
PANTHER
PTHR27003:SF1
151 584 434 9.80E-273 –
PANTHER
PTHR27003
151 584 434 9.80E-273 –
Coils
Coil
159 186 28 – –
Coils
Coil
194 249 56 – –
SUPERFAMILY
SSF56112
288 574 287 1.80E-58
IPR011009
Gene3D
G3DSA:3.30.200.20
296 370 75 2.90E-21 –
ProSiteProfiles
PS50011
312 577 266 26.619
IPR000719
Pfam
PF07714
317 566 250 3.20E-33
IPR001245
ProSitePatterns
PS00107
318 339 22 –
IPR017441
Gene3D
G3DSA:1.10.510.10
371 569 199 4.20E-31 –
SUPERFAMILY
SSF57850
593 664 72 6.98E-24 –
ProSiteProfiles
PS51698
594 664 71 34.907
IPR003613
Gene3D
G3DSA:3.30.40.10
594 664 71 8.50E-27
IPR013083
Pfam
PF04564
595 664 70 2.30E-17
IPR003613
SMART
SM00504
598 661 64 4.50E-31
IPR003613
PANTHER
PTHR27003
604 662 59 9.80E-273 –
PANTHER
PTHR27003:SF1
604 662 59 9.80E-273 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004842
Molecular function Ubiquitin-protein transferase activity Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of
GO:0016567
Biological process Protein ubiquitination The process in which one or more ubiquitin groups are added to a protein.
Subterm of

Genome browser

LORE1 insertions 19

Expression data

Expression pattern

Expression pattern of Lj2g3v0346240.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v0346240.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.