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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0560050 |
| Transcript ID | Lj2g3v0560050.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial-like [Glycine max] gi|356561794|ref|XP_003549163.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 302 | 302 | 2.80E-189 | – | |
| PANTHER | 1 | 302 | 302 | 2.80E-189 | – | |
| Pfam | 21 | 69 | 49 | 3.30E-10 | ||
| ProSiteProfiles | 22 | 56 | 35 | 12.704 | ||
| Gene3D | 24 | 53 | 30 | 9.90E-12 | ||
| TIGRFAM | 25 | 57 | 33 | 1.60E-08 | ||
| ProSiteProfiles | 57 | 91 | 35 | 5.875 | ||
| Gene3D | 90 | 154 | 65 | 9.90E-12 | ||
| ProSiteProfiles | 92 | 122 | 31 | 7.815 | ||
| Pfam | 97 | 122 | 26 | 0.013 | ||
| SUPERFAMILY | 103 | 147 | 45 | 1.46E-05 | ||
| ProSiteProfiles | 123 | 158 | 36 | 9.021 | ||
| TIGRFAM | 126 | 160 | 35 | 4.30E-06 | ||
| Pfam | 126 | 151 | 26 | 1.10E-06 | ||
| ProSiteProfiles | 159 | 194 | 36 | 8.769 | ||
| TIGRFAM | 161 | 195 | 35 | 4.50E-05 | ||
| Pfam | 162 | 188 | 27 | 0.0014 | ||
| ProSiteProfiles | 195 | 225 | 31 | 5.503 | ||
| Gene3D | 223 | 281 | 59 | 9.90E-12 | ||
| SUPERFAMILY | 242 | 281 | 40 | 1.46E-05 | ||
| ProSiteProfiles | 261 | 295 | 35 | 5.514 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v0560050.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0560050.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.