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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0633870 |
| Transcript ID | Lj2g3v0633870.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein NRDE2 homolog isoform X3 [Cicer arietinum] gi|502173002|ref|XP_004515233.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 544 | 544 | 0 | – | |
| Coils | 301 | 321 | 21 | – | – | |
| SMART | 306 | 338 | 33 | 37 | ||
| Pfam | 311 | 708 | 398 | 1.30E-90 | ||
| Gene3D | 315 | 404 | 90 | 6.20E-04 | ||
| SMART | 351 | 383 | 33 | 550 | ||
| Gene3D | 470 | 494 | 25 | 6.20E-04 | ||
| Coils | 540 | 560 | 21 | – | – | |
| PANTHER | 588 | 1181 | 594 | 0 | – | |
| SMART | 846 | 886 | 41 | 91 | ||
| SUPERFAMILY | 949 | 1133 | 185 | 5.44E-06 | ||
| SMART | 1045 | 1076 | 32 | 1200 | ||
| SMART | 1079 | 1113 | 35 | 0.26 | ||
| SMART | 1116 | 1148 | 33 | 1100 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | RNA processing | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. |
Expression pattern of Lj2g3v0633870.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0633870.1, powered by CORGI.
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