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Lj2g3v0777180.2

Overview

Field Value
Gene ID Lj2g3v0777180
Transcript ID Lj2g3v0777180.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: DNA replication licensing factor mcm4-B-like [Glycine max] gi|356538731|ref|XP_003537854.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11630:SF66
1 116 116 3.30E-59 –
PANTHER
PTHR11630
1 116 116 3.30E-59 –
ProSiteProfiles
PS50051
1 88 88 33.277
IPR001208
Pfam
PF00493
1 116 116 6.20E-38
IPR001208
Gene3D
G3DSA:3.40.50.300
1 71 71 2.30E-11
IPR027417
SUPERFAMILY
SSF52540
2 113 112 4.57E-08
IPR027417
PRINTS
PR01657
11 24 14 1.00E-12
IPR001208
PRINTS
PR01657
35 47 13 1.00E-12
IPR001208
PRINTS
PR01657
62 70 9 1.00E-12
IPR001208

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006270
Biological process DNA replication initiation The process in which DNA-dependent DNA replication is started; this begins with the ATP dependent loading of an initiator complex onto the DNA, this is followed by DNA melting and helicase activity. In bacteria, the gene products that enable the helicase activity are loaded after the initial melting and in archaea and eukaryotes, the gene products that enable the helicase activity are inactive when they are loaded and subsequently activate.
Subterm of
Part of

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj2g3v0777180.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v0777180.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.