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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1014320 |
| Transcript ID | Lj2g3v1014320.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic-like [Glycine max] gi|356571435|ref|XP_003553882.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | – | – | |
| Phobius | 1 | 4 | 4 | – | – | |
| Phobius | 5 | 16 | 12 | – | – | |
| Phobius | 17 | 22 | 6 | – | – | |
| Phobius | 23 | 488 | 466 | – | – | |
| SUPERFAMILY | 156 | 268 | 113 | 5.75E-11 | ||
| Gene3D | 157 | 268 | 112 | 6.10E-11 | ||
| PANTHER | 226 | 354 | 129 | 3.30E-114 | – | |
| PANTHER | 226 | 354 | 129 | 3.30E-114 | ||
| Coils | 228 | 248 | 21 | – | – | |
| CDD | 301 | 475 | 175 | 6.86E-102 | – | |
| Gene3D | 309 | 468 | 160 | 8.00E-19 | ||
| Pfam | 309 | 466 | 158 | 2.10E-24 | ||
| SUPERFAMILY | 310 | 370 | 61 | 8.33E-23 | ||
| ProSiteProfiles | 311 | 488 | 178 | 12.969 | ||
| PANTHER | 376 | 481 | 106 | 3.30E-114 | ||
| PANTHER | 376 | 481 | 106 | 3.30E-114 | – | |
| SUPERFAMILY | 399 | 469 | 71 | 8.33E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein peptidyl-prolyl isomerization | The modification of a protein by cis-trans isomerization of a proline residue. | ||
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). |
Expression pattern of Lj2g3v1014320.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1014320.2, powered by CORGI.
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