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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1024320 |
| Transcript ID | Lj2g3v1024320.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ATPase 11, plasma membrane-type-like [Glycine max] gi|356572262|ref|XP_003554288.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 64 | 64 | – | – | |
| PANTHER | 1 | 789 | 789 | 0 | – | |
| PANTHER | 1 | 789 | 789 | 0 | – | |
| SUPERFAMILY | 17 | 134 | 118 | 5.75E-86 | – | |
| SMART | 17 | 89 | 73 | 7.60E-21 | ||
| Pfam | 20 | 83 | 64 | 2.70E-14 | ||
| Gene3D | 34 | 68 | 35 | 5.80E-42 | ||
| TIGRFAM | 36 | 812 | 777 | 0 | ||
| Phobius | 65 | 88 | 24 | – | – | |
| TMHMM | 65 | 87 | 23 | – | – | |
| Gene3D | 69 | 128 | 60 | 5.70E-24 | ||
| Phobius | 89 | 99 | 11 | – | – | |
| TMHMM | 97 | 116 | 20 | – | – | |
| Phobius | 100 | 116 | 17 | – | – | |
| Pfam | 102 | 322 | 221 | 8.80E-61 | ||
| TIGRFAM | 103 | 350 | 248 | 1.40E-37 | ||
| Phobius | 117 | 246 | 130 | – | – | |
| Gene3D | 129 | 231 | 103 | 5.80E-42 | ||
| SUPERFAMILY | 134 | 231 | 98 | 8.76E-29 | – | |
| PRINTS | 181 | 195 | 15 | 4.90E-42 | – | |
| SUPERFAMILY | 231 | 325 | 95 | 5.75E-86 | – | |
| TMHMM | 244 | 266 | 23 | – | – | |
| Phobius | 247 | 269 | 23 | – | – | |
| Gene3D | 247 | 347 | 101 | 5.70E-24 | ||
| Phobius | 270 | 280 | 11 | – | – | |
| Phobius | 281 | 303 | 23 | – | – | |
| TMHMM | 281 | 303 | 23 | – | – | |
| Phobius | 304 | 648 | 345 | – | – | |
| SUPERFAMILY | 327 | 383 | 57 | 2.27E-40 | ||
| Pfam | 327 | 604 | 278 | 1.70E-18 | – | |
| PRINTS | 331 | 345 | 15 | 4.90E-42 | – | |
| ProSitePatterns | 333 | 339 | 7 | – | ||
| Gene3D | 348 | 489 | 142 | 4.90E-32 | ||
| SUPERFAMILY | 410 | 637 | 228 | 2.27E-40 | ||
| PRINTS | 447 | 465 | 19 | 4.00E-59 | ||
| PRINTS | 485 | 496 | 12 | 4.90E-42 | – | |
| PRINTS | 507 | 517 | 11 | 4.90E-42 | – | |
| Gene3D | 557 | 851 | 295 | 4.30E-100 | ||
| PRINTS | 562 | 578 | 17 | 4.00E-59 | ||
| TIGRFAM | 565 | 679 | 115 | 5.20E-28 | ||
| PRINTS | 590 | 606 | 17 | 4.00E-59 | ||
| PRINTS | 590 | 609 | 20 | 4.90E-42 | – | |
| PRINTS | 613 | 625 | 13 | 4.90E-42 | – | |
| PRINTS | 621 | 646 | 26 | 4.00E-59 | ||
| SUPERFAMILY | 639 | 853 | 215 | 5.75E-86 | – | |
| Phobius | 649 | 671 | 23 | – | – | |
| TMHMM | 649 | 671 | 23 | – | – | |
| Phobius | 672 | 676 | 5 | – | – | |
| Phobius | 677 | 694 | 18 | – | – | |
| Phobius | 695 | 713 | 19 | – | – | |
| TMHMM | 713 | 735 | 23 | – | – | |
| Phobius | 714 | 736 | 23 | – | – | |
| Phobius | 737 | 759 | 23 | – | – | |
| Phobius | 760 | 780 | 21 | – | – | |
| PRINTS | 766 | 787 | 22 | 4.00E-59 | ||
| Phobius | 781 | 791 | 11 | – | – | |
| TMHMM | 791 | 813 | 23 | – | – | |
| Phobius | 792 | 813 | 22 | – | – | |
| Phobius | 814 | 824 | 11 | – | – | |
| TMHMM | 823 | 842 | 20 | – | – | |
| Phobius | 825 | 842 | 18 | – | – | |
| PANTHER | 826 | 929 | 104 | 0 | – | |
| PANTHER | 826 | 929 | 104 | 0 | – | |
| Phobius | 843 | 956 | 114 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Proton-exporting ATPase activity, phosphorylative mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Proton export across plasma membrane | The directed movement of hydrogen ions (protons) from inside a cell, across the plasma membrane and into the extracellular region. |
Expression pattern of Lj2g3v1024320.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1024320.1, powered by CORGI.
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