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Lj2g3v1034360.1

Overview

Field Value
Gene ID Lj2g3v1034360
Transcript ID Lj2g3v1034360.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ABC transporter E family member 2-like [Cicer arietinum] gi|502161914|ref|XP_004512327.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 24 24 – –
PANTHER
PTHR19248
42 250 209 1.50E-67
IPR013283
ProSiteProfiles
PS50893
44 263 220 9.998
IPR003439
Pfam
PF00005
70 189 120 2.30E-11
IPR003439
SUPERFAMILY
SSF52540
70 240 171 5.33E-18
IPR027417
Gene3D
G3DSA:3.40.50.300
70 240 171 4.60E-17
IPR027417
SMART
SM00382
73 240 168 0.0035
IPR003593

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0016887
Molecular function ATPase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
Subterm of

Genome browser

LORE1 insertions 21

Expression data

Expression pattern

Expression pattern of Lj2g3v1034360.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1034360.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.