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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1192950 |
| Transcript ID | Lj2g3v1192950.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: phosphate transporter PHO1 homolog 1-like isoform 1 [Glycine max] gi|356496020|ref|XP_003516868.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 386 | 386 | – | – | |
| Pfam | 2 | 38 | 37 | 2.20E-12 | ||
| ProSiteProfiles | 2 | 336 | 335 | 31.492 | ||
| PANTHER | 2 | 53 | 52 | 0 | – | |
| PANTHER | 2 | 53 | 52 | 0 | – | |
| CDD | 3 | 332 | 330 | 4.69E-38 | – | |
| Pfam | 76 | 338 | 263 | 2.80E-49 | ||
| PANTHER | 79 | 162 | 84 | 0 | – | |
| PANTHER | 79 | 162 | 84 | 0 | – | |
| MobiDBLite | 153 | 202 | 50 | – | – | |
| PANTHER | 278 | 784 | 507 | 0 | – | |
| PANTHER | 278 | 784 | 507 | 0 | – | |
| Phobius | 387 | 407 | 21 | – | – | |
| TMHMM | 387 | 409 | 23 | – | – | |
| Phobius | 408 | 426 | 19 | – | – | |
| Phobius | 427 | 450 | 24 | – | – | |
| Pfam | 428 | 761 | 334 | 5.00E-85 | ||
| TMHMM | 429 | 451 | 23 | – | – | |
| Phobius | 451 | 474 | 24 | – | – | |
| TMHMM | 475 | 497 | 23 | – | – | |
| Phobius | 475 | 497 | 23 | – | – | |
| Phobius | 498 | 508 | 11 | – | – | |
| Phobius | 509 | 529 | 21 | – | – | |
| TMHMM | 512 | 529 | 18 | – | – | |
| Phobius | 530 | 654 | 125 | – | – | |
| ProSiteProfiles | 593 | 784 | 192 | 25.42 | ||
| TMHMM | 653 | 675 | 23 | – | – | |
| Phobius | 655 | 674 | 20 | – | – | |
| Phobius | 675 | 703 | 29 | – | – | |
| TMHMM | 703 | 720 | 18 | – | – | |
| Phobius | 704 | 724 | 21 | – | – | |
| Phobius | 725 | 784 | 60 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj2g3v1192950.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1192950.2, powered by CORGI.
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