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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1252590 |
| Transcript ID | Lj2g3v1252590.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At1g69290-like [Cicer arietinum] gi|502094348|ref|XP_004490197.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 64 | 64 | 1.10E-165 | – | |
| PANTHER | 1 | 64 | 64 | 1.10E-165 | – | |
| ProSiteProfiles | 44 | 79 | 36 | 6.029 | ||
| Pfam | 46 | 64 | 19 | 0.31 | ||
| Gene3D | 47 | 151 | 105 | 0.001 | ||
| PANTHER | 82 | 338 | 257 | 1.10E-165 | – | |
| PANTHER | 82 | 338 | 257 | 1.10E-165 | – | |
| Pfam | 110 | 220 | 111 | 6.70E-07 | ||
| ProSiteProfiles | 121 | 155 | 35 | 6.281 | ||
| ProSiteProfiles | 156 | 190 | 35 | 7.52 | ||
| Gene3D | 188 | 301 | 114 | 0.001 | ||
| ProSiteProfiles | 191 | 225 | 35 | 8.791 | ||
| ProSiteProfiles | 262 | 296 | 35 | 11.477 | ||
| Pfam | 266 | 309 | 44 | 1.30E-11 | ||
| TIGRFAM | 266 | 297 | 32 | 2.80E-07 | ||
| ProSiteProfiles | 297 | 327 | 31 | 6.456 | ||
| ProSiteProfiles | 339 | 373 | 35 | 5.722 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v1252590.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1252590.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.