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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1337690 |
| Transcript ID | Lj2g3v1337690.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At2g02750-like [Glycine max] gi|356501914|ref|XP_003519768.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 33 | 33 | 5.261 | ||
| PANTHER | 23 | 609 | 587 | 4.60E-275 | – | |
| PANTHER | 23 | 609 | 587 | 4.60E-275 | – | |
| ProSiteProfiles | 164 | 194 | 31 | 6.138 | ||
| ProSiteProfiles | 195 | 230 | 36 | 9.208 | ||
| Pfam | 195 | 243 | 49 | 7.60E-09 | ||
| TIGRFAM | 197 | 230 | 34 | 3.00E-04 | ||
| ProSiteProfiles | 263 | 293 | 31 | 6.39 | ||
| Pfam | 294 | 341 | 48 | 2.20E-15 | ||
| ProSiteProfiles | 294 | 328 | 35 | 12.156 | ||
| TIGRFAM | 296 | 329 | 34 | 9.00E-09 | ||
| ProSiteProfiles | 329 | 363 | 35 | 11.071 | ||
| Gene3D | 331 | 360 | 30 | 3.20E-10 | ||
| TIGRFAM | 332 | 361 | 30 | 6.20E-07 | ||
| ProSiteProfiles | 399 | 429 | 31 | 5.623 | ||
| SUPERFAMILY | 428 | 456 | 29 | 2.69E-05 | ||
| Gene3D | 430 | 588 | 159 | 3.20E-10 | ||
| ProSiteProfiles | 432 | 466 | 35 | 13.68 | ||
| Pfam | 435 | 479 | 45 | 3.10E-13 | ||
| TIGRFAM | 436 | 467 | 32 | 2.30E-10 | ||
| ProSiteProfiles | 467 | 502 | 36 | 9.251 | ||
| TIGRFAM | 469 | 502 | 34 | 2.40E-04 | ||
| ProSiteProfiles | 503 | 537 | 35 | 7.87 | ||
| Pfam | 507 | 530 | 24 | 0.19 | ||
| SUPERFAMILY | 518 | 587 | 70 | 2.69E-05 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v1337690.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1337690.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.