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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1349180 |
| Transcript ID | Lj2g3v1349180.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine max] gi|356497843|ref|XP_003517766.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 21 | 21 | – | – | |
| PANTHER | 11 | 394 | 384 | 3.90E-183 | – | |
| PANTHER | 11 | 394 | 384 | 3.90E-183 | – | |
| Gene3D | 20 | 393 | 374 | 2.60E-92 | ||
| ProSiteProfiles | 21 | 72 | 52 | 15.851 | ||
| SUPERFAMILY | 21 | 294 | 274 | 9.81E-70 | ||
| PRINTS | 22 | 38 | 17 | 8.60E-19 | ||
| Pfam | 22 | 69 | 48 | 4.60E-11 | ||
| PRINTS | 56 | 69 | 14 | 8.60E-19 | ||
| Pfam | 72 | 121 | 50 | 9.10E-13 | ||
| ProSiteProfiles | 73 | 125 | 53 | 14.363 | ||
| PRINTS | 75 | 91 | 17 | 8.60E-19 | ||
| Pfam | 126 | 174 | 49 | 8.10E-12 | ||
| ProSiteProfiles | 126 | 177 | 52 | 14.062 | ||
| ProSitePatterns | 164 | 174 | 11 | – | ||
| PRINTS | 164 | 180 | 17 | 8.60E-19 | ||
| ProSiteProfiles | 181 | 234 | 54 | 14.645 | ||
| Pfam | 182 | 231 | 50 | 1.70E-07 | ||
| PRINTS | 268 | 286 | 19 | 8.60E-19 | ||
| ProSiteProfiles | 279 | 340 | 62 | 10.584 | ||
| ProSitePatterns | 327 | 337 | 11 | – | ||
| PRINTS | 336 | 357 | 22 | 8.60E-19 | ||
| ProSiteProfiles | 341 | 395 | 55 | 12.434 | ||
| Pfam | 341 | 392 | 52 | 1.30E-08 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj2g3v1349180.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1349180.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.