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Lj2g3v1389480.1

Overview

Field Value
Gene ID Lj2g3v1389480
Transcript ID Lj2g3v1389480.1
Lotus japonicus genome version MG20 v3.0
Description Serine/threonine protein kinase [Medicago truncatula] gi|357505343|ref|XP_003622960.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 74 74 – –
PANTHER
PTHR27001
1 14 14 1.10E-250 –
PANTHER
PTHR27001:SF48
1 14 14 1.10E-250 –
PANTHER
PTHR27001
58 375 318 1.10E-250 –
PANTHER
PTHR27001:SF48
58 375 318 1.10E-250 –
Gene3D
G3DSA:2.60.120.200
72 105 34 4.10E-08
IPR013320
SUPERFAMILY
SSF56112
77 399 323 6.66E-85
IPR011009
SMART
SM00220
91 368 278 2.50E-46
IPR000719
ProSiteProfiles
PS50011
91 368 278 38.252
IPR000719
Pfam
PF00069
92 362 271 2.20E-47
IPR000719
CDD
cd14066
97 365 269 6.60E-97 –
ProSitePatterns
PS00107
97 120 24 –
IPR017441
Gene3D
G3DSA:3.30.200.20
106 168 63 5.00E-26 –
Gene3D
G3DSA:1.10.510.10
169 377 209 7.10E-44 –
ProSitePatterns
PS00108
214 226 13 –
IPR008271
MobiDBLite
mobidb-lite
375 400 26 – –
PANTHER
PTHR27001:SF48
408 429 22 1.10E-250 –
PANTHER
PTHR27001
408 429 22 1.10E-250 –
MobiDBLite
mobidb-lite
421 443 23 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 9

Expression data

Expression pattern

Expression pattern of Lj2g3v1389480.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1389480.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.