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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1426600 |
| Transcript ID | Lj2g3v1426600.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter B family member 26, chloroplastic-like [Cicer arietinum] gi|502166936|ref|XP_004514017.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 114 | 114 | – | – | |
| PANTHER | 71 | 467 | 397 | 1.90E-167 | – | |
| PANTHER | 71 | 467 | 397 | 1.90E-167 | – | |
| SUPERFAMILY | 104 | 417 | 314 | 2.09E-48 | ||
| Gene3D | 104 | 415 | 312 | 1.40E-52 | – | |
| Phobius | 115 | 145 | 31 | – | – | |
| ProSiteProfiles | 118 | 399 | 282 | 34.113 | ||
| Pfam | 119 | 381 | 263 | 3.20E-32 | ||
| Phobius | 146 | 156 | 11 | – | – | |
| Phobius | 157 | 181 | 25 | – | – | |
| Phobius | 182 | 245 | 64 | – | – | |
| Phobius | 246 | 274 | 29 | – | – | |
| TMHMM | 253 | 275 | 23 | – | – | |
| Phobius | 275 | 476 | 202 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v1426600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1426600.1, powered by CORGI.
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