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Lj2g3v1499300.2

Overview

Field Value
Gene ID Lj2g3v1499300
Transcript ID Lj2g3v1499300.2
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable receptor-like protein kinase At5g39030-like isoform X2 [Cicer arietinum] gi|502123882|ref|XP_004498297.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27009
1 291 291 5.00E-81 –
Phobius
NON_CYTOPLASMIC_DOMAIN
1 182 182 – –
PANTHER
PTHR27009:SF19
1 291 291 5.00E-81 –
TMHMM
TMhelix
183 216 34 – –
Phobius
TRANSMEMBRANE
183 216 34 – –
Gene3D
G3DSA:2.60.120.200
194 267 74 7.50E-06
IPR013320
Phobius
CYTOPLASMIC_DOMAIN
217 314 98 – –
SUPERFAMILY
SSF56112
237 287 51 3.81E-08
IPR011009
ProSitePatterns
PS00107
260 282 23 –
IPR017441
Gene3D
G3DSA:3.30.200.20
268 291 24 1.50E-06 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of

Genome browser

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj2g3v1499300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1499300.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.