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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1536320 |
| Transcript ID | Lj2g3v1536320.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 254 | 254 | 1.00E-59 | ||
| SUPERFAMILY | 1 | 231 | 231 | 7.99E-60 | ||
| PANTHER | 1 | 580 | 580 | 2.00E-273 | – | |
| PANTHER | 1 | 580 | 580 | 2.00E-273 | – | |
| Gene3D | 2 | 123 | 122 | 5.70E-11 | ||
| PRINTS | 70 | 84 | 15 | 5.10E-12 | – | |
| PRINTS | 168 | 182 | 15 | 5.10E-12 | – | |
| SUPERFAMILY | 295 | 498 | 204 | 2.13E-39 | ||
| Gene3D | 368 | 501 | 134 | 1.40E-26 | ||
| SMART | 424 | 451 | 28 | 46 | ||
| SUPERFAMILY | 528 | 755 | 228 | 2.13E-39 | ||
| Gene3D | 563 | 629 | 67 | 1.40E-26 | ||
| SUPERFAMILY | 639 | 963 | 325 | 1.88E-20 | – | |
| Gene3D | 669 | 771 | 103 | 1.30E-05 | ||
| PRINTS | 690 | 706 | 17 | 5.10E-12 | – | |
| PANTHER | 733 | 750 | 18 | 2.00E-273 | – | |
| PANTHER | 733 | 750 | 18 | 2.00E-273 | – | |
| SMART | 735 | 760 | 26 | 2.3 | ||
| Gene3D | 772 | 970 | 199 | 5.00E-14 | ||
| PANTHER | 808 | 840 | 33 | 2.00E-273 | – | |
| PANTHER | 808 | 840 | 33 | 2.00E-273 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of Lj2g3v1536320.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1536320.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.