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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1549760 |
| Transcript ID | Lj2g3v1549760.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: transcription initiation factor TFIID subunit 1-A-like isoform X3 [Cicer arietinum] gi|502162054|ref|XP_004512374.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 153 | 153 | 6.60E-25 | ||
| PANTHER | 1 | 475 | 475 | 1.30E-301 | – | |
| PANTHER | 1 | 475 | 475 | 1.30E-301 | – | |
| MobiDBLite | 239 | 259 | 21 | – | – | |
| Coils | 269 | 289 | 21 | – | – | |
| Pfam | 409 | 427 | 19 | 8.10E-05 | – | |
| MobiDBLite | 445 | 473 | 29 | – | – | |
| MobiDBLite | 496 | 517 | 22 | – | – | |
| PANTHER | 527 | 709 | 183 | 1.30E-301 | – | |
| PANTHER | 527 | 709 | 183 | 1.30E-301 | – | |
| Coils | 671 | 710 | 40 | – | – | |
| MobiDBLite | 689 | 737 | 49 | – | – | |
| PANTHER | 740 | 882 | 143 | 1.30E-301 | – | |
| PANTHER | 740 | 882 | 143 | 1.30E-301 | – | |
| SUPERFAMILY | 750 | 871 | 122 | 2.09E-27 | ||
| Gene3D | 751 | 843 | 93 | 1.70E-24 | ||
| SMART | 758 | 869 | 112 | 2.30E-23 | ||
| CDD | 768 | 864 | 97 | 1.42E-24 | – | |
| ProSiteProfiles | 779 | 849 | 71 | 19.178 | ||
| Pfam | 780 | 846 | 67 | 9.70E-19 | ||
| PRINTS | 782 | 795 | 14 | 2.20E-11 | ||
| ProSitePatterns | 784 | 841 | 58 | – | ||
| PRINTS | 796 | 812 | 17 | 2.20E-11 | ||
| PRINTS | 812 | 830 | 19 | 2.20E-11 | ||
| PRINTS | 830 | 849 | 20 | 2.20E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v1549760.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1549760.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.