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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1550100 |
| Transcript ID | Lj2g3v1550100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Major facilitator superfamily protein isoform 1 [Theobroma cacao] gi|508778157|gb|EOY25413.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 567 | 567 | 0 | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 9 | 9 | – | – | |
| Phobius | 1 | 21 | 21 | – | – | |
| PANTHER | 1 | 567 | 567 | 0 | – | |
| SUPERFAMILY | 6 | 196 | 191 | 9.59E-14 | ||
| Pfam | 7 | 252 | 246 | 2.90E-81 | ||
| Phobius | 10 | 17 | 8 | – | – | |
| Phobius | 18 | 21 | 4 | – | – | |
| Phobius | 22 | 67 | 46 | – | – | |
| TMHMM | 64 | 86 | 23 | – | – | |
| Phobius | 68 | 92 | 25 | – | – | |
| Phobius | 93 | 103 | 11 | – | – | |
| TMHMM | 96 | 118 | 23 | – | – | |
| Phobius | 104 | 130 | 27 | – | – | |
| Phobius | 131 | 135 | 5 | – | – | |
| Phobius | 136 | 154 | 19 | – | – | |
| Phobius | 155 | 165 | 11 | – | – | |
| Phobius | 166 | 186 | 21 | – | – | |
| TMHMM | 167 | 189 | 23 | – | – | |
| Phobius | 187 | 205 | 19 | – | – | |
| TMHMM | 204 | 223 | 20 | – | – | |
| Phobius | 206 | 224 | 19 | – | – | |
| Phobius | 225 | 235 | 11 | – | – | |
| TMHMM | 236 | 258 | 23 | – | – | |
| Phobius | 236 | 257 | 22 | – | – | |
| Phobius | 258 | 353 | 96 | – | – | |
| SUPERFAMILY | 335 | 556 | 222 | 9.59E-14 | ||
| Gene3D | 349 | 554 | 206 | 4.80E-13 | – | |
| Phobius | 354 | 372 | 19 | – | – | |
| TMHMM | 354 | 376 | 23 | – | – | |
| Phobius | 373 | 420 | 48 | – | – | |
| TMHMM | 416 | 438 | 23 | – | – | |
| Phobius | 421 | 440 | 20 | – | – | |
| Phobius | 441 | 451 | 11 | – | – | |
| Phobius | 452 | 473 | 22 | – | – | |
| TMHMM | 453 | 475 | 23 | – | – | |
| Phobius | 474 | 484 | 11 | – | – | |
| TMHMM | 482 | 504 | 23 | – | – | |
| Phobius | 485 | 504 | 20 | – | – | |
| Phobius | 505 | 529 | 25 | – | – | |
| Phobius | 530 | 553 | 24 | – | – | |
| TMHMM | 530 | 552 | 23 | – | – | |
| Phobius | 554 | 574 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj2g3v1550100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1550100.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.