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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1803090 |
| Transcript ID | Lj2g3v1803090.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Major facilitator superfamily protein isoform 1 [Theobroma cacao] gi|508699280|gb|EOX91176.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| PANTHER | 1 | 467 | 467 | 4.50E-246 | – | |
| PANTHER | 1 | 467 | 467 | 4.50E-246 | – | |
| SignalP | 1 | 21 | 21 | – | – | |
| TMHMM | 5 | 22 | 18 | – | – | |
| Phobius | 6 | 16 | 11 | – | – | |
| SUPERFAMILY | 12 | 455 | 444 | 1.01E-42 | ||
| ProSiteProfiles | 12 | 454 | 443 | 18.034 | ||
| CDD | 13 | 400 | 388 | 2.08E-11 | ||
| Gene3D | 14 | 197 | 184 | 8.30E-23 | – | |
| Phobius | 17 | 24 | 8 | – | – | |
| Pfam | 18 | 349 | 332 | 4.10E-26 | ||
| Phobius | 25 | 47 | 23 | – | – | |
| Phobius | 48 | 71 | 24 | – | – | |
| TMHMM | 51 | 73 | 23 | – | – | |
| Phobius | 72 | 77 | 6 | – | – | |
| Phobius | 78 | 95 | 18 | – | – | |
| TMHMM | 78 | 97 | 20 | – | – | |
| Phobius | 96 | 106 | 11 | – | – | |
| TMHMM | 102 | 124 | 23 | – | – | |
| Phobius | 107 | 125 | 19 | – | – | |
| Phobius | 126 | 136 | 11 | – | – | |
| TMHMM | 137 | 159 | 23 | – | – | |
| Phobius | 137 | 160 | 24 | – | – | |
| Phobius | 161 | 171 | 11 | – | – | |
| TMHMM | 169 | 191 | 23 | – | – | |
| Phobius | 172 | 192 | 21 | – | – | |
| Phobius | 193 | 212 | 20 | – | – | |
| Phobius | 213 | 232 | 20 | – | – | |
| Phobius | 233 | 243 | 11 | – | – | |
| TMHMM | 243 | 265 | 23 | – | – | |
| Phobius | 244 | 265 | 22 | – | – | |
| Gene3D | 253 | 453 | 201 | 6.70E-11 | – | |
| Phobius | 266 | 276 | 11 | – | – | |
| TMHMM | 275 | 297 | 23 | – | – | |
| Phobius | 277 | 296 | 20 | – | – | |
| Phobius | 297 | 307 | 11 | – | – | |
| Phobius | 308 | 328 | 21 | – | – | |
| TMHMM | 310 | 332 | 23 | – | – | |
| Phobius | 329 | 334 | 6 | – | – | |
| Phobius | 335 | 354 | 20 | – | – | |
| TMHMM | 342 | 364 | 23 | – | – | |
| Phobius | 355 | 426 | 72 | – | – | |
| TMHMM | 385 | 407 | 23 | – | – | |
| TMHMM | 427 | 449 | 23 | – | – | |
| Phobius | 427 | 449 | 23 | – | – | |
| Phobius | 450 | 467 | 18 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v1803090.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1803090.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.