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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1985390 |
| Transcript ID | Lj2g3v1985390.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: two-component response regulator-like APRR2-like [Glycine max] gi|356540587|ref|XP_003538769.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 555 | 554 | 0 | – | |
| PANTHER | 2 | 555 | 554 | 0 | – | |
| SUPERFAMILY | 16 | 134 | 119 | 4.55E-12 | ||
| Gene3D | 16 | 150 | 135 | 1.60E-12 | – | |
| ProSiteProfiles | 19 | 132 | 114 | 17.076 | ||
| Pfam | 20 | 126 | 107 | 1.20E-04 | ||
| MobiDBLite | 177 | 256 | 80 | – | – | |
| MobiDBLite | 270 | 306 | 37 | – | – | |
| ProSiteProfiles | 310 | 369 | 60 | 15.989 | ||
| Gene3D | 311 | 370 | 60 | 5.30E-26 | ||
| SUPERFAMILY | 312 | 370 | 59 | 2.15E-17 | ||
| TIGRFAM | 313 | 368 | 56 | 4.10E-24 | ||
| Pfam | 316 | 365 | 50 | 5.50E-07 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of Lj2g3v1985390.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1985390.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.