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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2002310 |
| Transcript ID | Lj2g3v2002310.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X3 [Cicer arietinum] gi|502114219|ref|XP_004494898.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 546 | 546 | 0 | – | |
| PANTHER | 1 | 546 | 546 | 0 | – | |
| Phobius | 1 | 369 | 369 | – | – | |
| Gene3D | 40 | 193 | 154 | 1.30E-30 | ||
| CDD | 41 | 137 | 97 | 9.44E-12 | – | |
| ProSiteProfiles | 42 | 318 | 277 | 57.83 | ||
| SMART | 42 | 71 | 30 | 6.1 | ||
| ProSiteProfiles | 42 | 74 | 33 | 9.271 | ||
| SUPERFAMILY | 46 | 311 | 266 | 1.80E-54 | ||
| SMART | 81 | 110 | 30 | 2 | ||
| Pfam | 101 | 176 | 76 | 7.50E-09 | ||
| CDD | 112 | 239 | 128 | 9.97E-26 | – | |
| SMART | 116 | 145 | 30 | 0.97 | ||
| ProSiteProfiles | 150 | 182 | 33 | 10.339 | ||
| SMART | 150 | 179 | 30 | 0.0026 | ||
| CDD | 183 | 306 | 124 | 4.34E-32 | – | |
| Pfam | 183 | 241 | 59 | 5.40E-12 | ||
| ProSiteProfiles | 184 | 216 | 33 | 11.14 | ||
| SMART | 184 | 213 | 30 | 4.70E-04 | ||
| Gene3D | 194 | 308 | 115 | 6.40E-33 | ||
| SMART | 218 | 248 | 31 | 0.83 | ||
| ProSiteProfiles | 218 | 251 | 34 | 8.977 | ||
| Pfam | 242 | 294 | 53 | 4.60E-13 | – | |
| SMART | 252 | 282 | 31 | 0.0011 | ||
| ProSiteProfiles | 252 | 285 | 34 | 11.594 | ||
| ProSiteProfiles | 286 | 318 | 33 | 8.95 | ||
| SMART | 286 | 316 | 31 | 6 | ||
| MobiDBLite | 311 | 330 | 20 | – | – | |
| Pfam | 367 | 477 | 111 | 1.20E-24 | ||
| TMHMM | 370 | 392 | 23 | – | – | |
| Phobius | 370 | 396 | 27 | – | – | |
| Phobius | 397 | 415 | 19 | – | – | |
| TMHMM | 415 | 437 | 23 | – | – | |
| Phobius | 416 | 438 | 23 | – | – | |
| Phobius | 439 | 458 | 20 | – | – | |
| TMHMM | 457 | 479 | 23 | – | – | |
| Phobius | 459 | 479 | 21 | – | – | |
| Phobius | 480 | 484 | 5 | – | – | |
| Phobius | 485 | 510 | 26 | – | – | |
| TMHMM | 489 | 511 | 23 | – | – | |
| Phobius | 511 | 546 | 36 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v2002310.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2002310.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.