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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2002390 |
| Transcript ID | Lj2g3v2002390.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: heat shock protein STI-like [Glycine max] gi|356540381|ref|XP_003538668.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 75 | 75 | – | – | |
| Coils | 49 | 70 | 22 | – | – | |
| Gene3D | 64 | 196 | 133 | 1.20E-25 | ||
| SUPERFAMILY | 65 | 192 | 128 | 3.79E-42 | ||
| SMART | 66 | 99 | 34 | 0.0013 | ||
| ProSiteProfiles | 66 | 99 | 34 | 9.824 | ||
| ProSiteProfiles | 66 | 306 | 241 | 31.122 | ||
| Pfam | 73 | 114 | 42 | 3.00E-09 | ||
| PANTHER | 93 | 393 | 301 | 1.90E-231 | – | |
| PANTHER | 93 | 393 | 301 | 1.90E-231 | – | |
| ProSiteProfiles | 100 | 133 | 34 | 6.254 | ||
| SMART | 100 | 133 | 34 | 7.80E-04 | ||
| SMART | 141 | 178 | 38 | 39 | ||
| ProSiteProfiles | 145 | 178 | 34 | 5.015 | ||
| Coils | 177 | 197 | 21 | – | – | |
| Gene3D | 201 | 323 | 123 | 1.50E-39 | ||
| SUPERFAMILY | 204 | 317 | 114 | 7.59E-43 | ||
| ProSiteProfiles | 205 | 238 | 34 | 9.027 | ||
| SMART | 205 | 238 | 34 | 0.012 | ||
| Pfam | 212 | 253 | 42 | 1.40E-08 | ||
| SMART | 239 | 272 | 34 | 1.20E-04 | ||
| ProSiteProfiles | 239 | 272 | 34 | 8.437 | ||
| SMART | 273 | 306 | 34 | 5.40E-06 | ||
| ProSiteProfiles | 273 | 306 | 34 | 11.505 | ||
| Pfam | 274 | 306 | 33 | 1.50E-07 | ||
| SMART | 343 | 382 | 40 | 6.00E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v2002390.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2002390.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.