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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2002900 |
| Transcript ID | Lj2g3v2002900.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | subtilase [Lotus japonicus] gi|163644224|dbj|BAF95755.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 47 | 47 | – | – | |
| PANTHER | 24 | 655 | 632 | 0 | ||
| PANTHER | 24 | 655 | 632 | 0 | – | |
| TMHMM | 25 | 47 | 23 | – | – | |
| Phobius | 29 | 39 | 11 | – | – | |
| Phobius | 40 | 47 | 8 | – | – | |
| Phobius | 48 | 658 | 611 | – | – | |
| Pfam | 59 | 137 | 79 | 3.70E-13 | ||
| Gene3D | 111 | 254 | 144 | 2.10E-15 | ||
| SUPERFAMILY | 136 | 347 | 212 | 3.67E-48 | ||
| PRINTS | 160 | 179 | 20 | 2.50E-15 | ||
| Pfam | 160 | 255 | 96 | 3.80E-07 | ||
| ProSitePatterns | 165 | 176 | 12 | – | ||
| PRINTS | 224 | 237 | 14 | 2.50E-15 | ||
| Gene3D | 255 | 318 | 64 | 3.20E-32 | ||
| Pfam | 264 | 529 | 266 | 4.40E-19 | ||
| CDD | 317 | 444 | 128 | 3.88E-29 | – | |
| Gene3D | 337 | 442 | 106 | 9.40E-09 | – | |
| Pfam | 341 | 430 | 90 | 1.80E-07 | ||
| Gene3D | 455 | 529 | 75 | 3.20E-32 | ||
| SUPERFAMILY | 459 | 530 | 72 | 3.67E-48 | ||
| PRINTS | 505 | 521 | 17 | 2.50E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj2g3v2002900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2002900.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.