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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2002910 |
| Transcript ID | Lj2g3v2002910.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | subtilase [Lotus japonicus] gi|163644224|dbj|BAF95755.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 9 | 9 | – | – | |
| PANTHER | 1 | 747 | 747 | 0 | ||
| SignalP | 1 | 28 | 28 | – | – | |
| PANTHER | 1 | 747 | 747 | 0 | – | |
| SignalP | 1 | 28 | 28 | – | – | |
| Phobius | 10 | 20 | 11 | – | – | |
| Phobius | 21 | 28 | 8 | – | – | |
| Phobius | 29 | 750 | 722 | – | – | |
| Pfam | 40 | 118 | 79 | 4.40E-13 | ||
| SUPERFAMILY | 117 | 376 | 260 | 9.56E-76 | ||
| CDD | 117 | 569 | 453 | 8.59E-115 | – | |
| Gene3D | 132 | 347 | 216 | 6.10E-74 | ||
| PRINTS | 141 | 160 | 20 | 3.50E-15 | ||
| Pfam | 141 | 575 | 435 | 4.00E-49 | ||
| ProSitePatterns | 146 | 157 | 12 | – | ||
| PRINTS | 205 | 218 | 14 | 3.50E-15 | ||
| CDD | 346 | 471 | 126 | 1.51E-34 | – | |
| Gene3D | 362 | 469 | 108 | 2.00E-08 | – | |
| Pfam | 370 | 456 | 87 | 2.10E-08 | ||
| Gene3D | 482 | 601 | 120 | 6.10E-74 | ||
| SUPERFAMILY | 486 | 606 | 121 | 9.56E-76 | ||
| PRINTS | 532 | 548 | 17 | 3.50E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj2g3v2002910.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2002910.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.