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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2014150 |
| Transcript ID | Lj2g3v2014150.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like [Glycine max] gi|356577033|ref|XP_003556634.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 68 | 357 | 290 | 1.60E-126 | – | |
| Pfam | 69 | 116 | 48 | 3.50E-14 | ||
| ProSiteProfiles | 70 | 104 | 35 | 12.375 | ||
| TIGRFAM | 72 | 106 | 35 | 7.70E-07 | ||
| ProSiteProfiles | 105 | 138 | 34 | 6.347 | ||
| Pfam | 138 | 185 | 48 | 4.50E-11 | ||
| Gene3D | 139 | 343 | 205 | 2.50E-08 | ||
| ProSiteProfiles | 139 | 173 | 35 | 12.912 | ||
| SUPERFAMILY | 141 | 179 | 39 | 2.66E-05 | ||
| TIGRFAM | 142 | 174 | 33 | 2.40E-07 | ||
| ProSiteProfiles | 174 | 208 | 35 | 11.016 | ||
| TIGRFAM | 176 | 208 | 33 | 5.50E-04 | ||
| ProSiteProfiles | 209 | 243 | 35 | 9.887 | ||
| TIGRFAM | 212 | 245 | 34 | 6.10E-04 | ||
| SUPERFAMILY | 216 | 342 | 127 | 2.66E-05 | ||
| Pfam | 240 | 271 | 32 | 1.20E-06 | ||
| ProSiteProfiles | 244 | 278 | 35 | 12.123 | ||
| TIGRFAM | 247 | 280 | 34 | 2.60E-08 | ||
| Pfam | 278 | 326 | 49 | 1.20E-14 | ||
| ProSiteProfiles | 279 | 313 | 35 | 11.893 | ||
| TIGRFAM | 282 | 315 | 34 | 5.90E-08 | ||
| ProSiteProfiles | 314 | 348 | 35 | 12.178 | ||
| TIGRFAM | 316 | 348 | 33 | 1.50E-05 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v2014150.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2014150.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.