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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2124850 |
| Transcript ID | Lj2g3v2124850.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase-like isoform X1 [Cicer arietinum] gi|502159240|ref|XP_004511439.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 78 | 330 | 253 | 0 | – | |
| PANTHER | 78 | 330 | 253 | 0 | – | |
| SUPERFAMILY | 120 | 312 | 193 | 1.21E-54 | – | |
| Pfam | 131 | 298 | 168 | 4.10E-45 | ||
| SMART | 146 | 275 | 130 | 3.80E-08 | ||
| CDD | 148 | 285 | 138 | 9.52E-06 | – | |
| Gene3D | 300 | 333 | 34 | 1.00E-46 | – | |
| PANTHER | 411 | 860 | 450 | 0 | – | |
| PANTHER | 411 | 860 | 450 | 0 | – | |
| CDD | 420 | 553 | 134 | 2.75E-29 | ||
| Gene3D | 436 | 545 | 110 | 1.00E-46 | – | |
| SUPERFAMILY | 440 | 568 | 129 | 4.90E-41 | – | |
| Pfam | 447 | 566 | 120 | 2.60E-29 | ||
| SMART | 447 | 566 | 120 | 2.00E-50 | ||
| Gene3D | 806 | 858 | 53 | 2.80E-10 | ||
| Pfam | 807 | 858 | 52 | 4.80E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Guanosine tetraphosphate metabolic process | The chemical reactions and pathways involving guanine tetraphosphate (5'-ppGpp-3'), a derivative of guanine riboside with four phosphates. |
Expression pattern of Lj2g3v2124850.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2124850.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.