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Lj2g3v2124900.1

Overview

Field Value
Gene ID Lj2g3v2124900
Transcript ID Lj2g3v2124900.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: exportin-1-like isoform 2 [Glycine max] gi|356538753|ref|XP_003537865.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11223
17 423 407 3.40E-228 –
Gene3D
G3DSA:1.25.10.10
179 501 323 1.70E-129
IPR011989
SUPERFAMILY
SSF48371
179 501 323 2.57E-111
IPR016024
Pfam
PF08767
180 501 322 3.70E-126
IPR014877
SMART
SM01102
180 502 323 4.40E-184
IPR014877
PANTHER
PTHR11223
446 534 89 3.40E-228 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005049
Molecular function Nuclear export signal receptor activity Combining with a nuclear export signal (NES) on a cargo to be transported, to mediate transport of a the cargo through the nuclear pore, from the nuclear lumen to the cytoplasm. The cargo can be either a RNA or a protein.
Subterm of

Genome browser

LORE1 insertions 19

Expression data

Expression pattern

Expression pattern of Lj2g3v2124900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v2124900.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.