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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR014877
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 16 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.955s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3716950.1
n.a. Exportin-1 [Medicago truncatula] gi|357481145|ref|XP_003610858.1| chr1 42822951 42836649 +
3 domain predictions
1 GO term
Lj1g3v5000600.1
n.a. PREDICTED: exportin-4-like isoform X1 [Cicer arietinum] gi|502113754|ref|XP_004494748.1| chr1 60868955 60875929 -
2 domain predictions
1 GO term
Lj2g3v2124900.1
n.a. PREDICTED: exportin-1-like isoform 2 [Glycine max] gi|356538753|ref|XP_003537865.1| chr2 32061176 32071009 -
3 domain predictions
1 GO term
Lj3g3v3627880.1
n.a. PREDICTED: exportin-1-like isoform 1 [Glycine max] gi|356538463|ref|XP_003537723.1| chr3 43757984 43770143 -
3 domain predictions
1 GO term
Lj3g3v3628910.1
n.a. PREDICTED: exportin-1-like isoform 1 [Glycine max] gi|356538463|ref|XP_003537723.1| chr3 43789065 43800927 -
3 domain predictions
1 GO term
LotjaGi1g1v0785100.1
n.a. Exportin-4; TAIR: AT3G04490.2 exportin-4 protein; Swiss-Prot: sp|Q499Y0|XPO4_XENLA Exportin-4; TrEMBL-Plants: tr|K7N067|K7N067_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0785100 LjG1.1_chr1 135759537 135777979 -
2 domain predictions
1 GO term
LotjaGi1g1v0785100.2
n.a. Exportin-4; TAIR: AT3G04490.2 exportin-4 protein; Swiss-Prot: sp|Q5ZMR9|XPO4_CHICK Exportin-4; TrEMBL-Plants: tr|K7N067|K7N067_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0785100 LjG1.1_chr1 135760506 135772400 -
2 domain predictions
1 GO term
LotjaGi1g1v0785100.3
n.a. Exportin-4; TAIR: AT3G04490.2 exportin-4 protein; Swiss-Prot: sp|Q499Y0|XPO4_XENLA Exportin-4; TrEMBL-Plants: tr|K7N067|K7N067_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0785100 LjG1.1_chr1 135760506 135775751 -
2 domain predictions
1 GO term
LotjaGi1g1v0785100.4
n.a. Exportin-4; TAIR: AT3G04490.2 exportin-4 protein; Swiss-Prot: sp|Q499Y0|XPO4_XENLA Exportin-4; TrEMBL-Plants: tr|K7N067|K7N067_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0785100 LjG1.1_chr1 135760506 135775797 -
2 domain predictions
1 GO term
LotjaGi2g1v0449000.1
n.a. Exportin-1; TAIR: AT5G17020.1 exportin 1A; Swiss-Prot: sp|Q9SMV6|XPO1A_ARATH Protein EXPORTIN 1A; TrEMBL-Plants: tr|A0A0S3SEC4|A0A0S3SEC4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0449000 LjG1.1_chr2 94269514 94284180 -
3 domain predictions
1 GO term
LotjaGi2g1v0449000.3
n.a. Exportin-1; TAIR: AT5G17020.1 exportin 1A; Swiss-Prot: sp|Q9SMV6|XPO1A_ARATH Protein EXPORTIN 1A; TrEMBL-Plants: tr|A0A0S3SEC4|A0A0S3SEC4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0449000 LjG1.1_chr2 94270338 94283994 -
3 domain predictions
1 GO term
LotjaGi2g1v0449000.4
n.a. Exportin-1; TAIR: AT5G17020.1 exportin 1A; Swiss-Prot: sp|Q9SMV6|XPO1A_ARATH Protein EXPORTIN 1A; TrEMBL-Plants: tr|A0A0S3SEC4|A0A0S3SEC4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0449000 LjG1.1_chr2 94270342 94283994 -
3 domain predictions
1 GO term
LotjaGi2g1v0449000.6
n.a. Exportin-1; TAIR: AT5G17020.2 exportin 1A; Swiss-Prot: sp|Q9SMV6|XPO1A_ARATH Protein EXPORTIN 1A; TrEMBL-Plants: tr|A0A0L9V7V7|A0A0L9V7V7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0449000 LjG1.1_chr2 94270342 94283994 -
3 domain predictions
1 GO term
LotjaGi2g1v0449000.7
n.a. Exportin-1; TAIR: AT5G17020.1 exportin 1A; Swiss-Prot: sp|Q9SMV6|XPO1A_ARATH Protein EXPORTIN 1A; TrEMBL-Plants: tr|A0A0S3SEC4|A0A0S3SEC4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0449000 LjG1.1_chr2 94270342 94283994 -
3 domain predictions
1 GO term
LotjaGi3g1v0538500.1
n.a. Exportin-1; TAIR: AT5G17020.1 exportin 1A; Swiss-Prot: sp|Q9SMV6|XPO1A_ARATH Protein EXPORTIN 1A; TrEMBL-Plants: tr|I1LII4|I1LII4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0538500 LjG1.1_chr3 95484905 95497810 -
3 domain predictions
1 GO term
LotjaGi3g1v0538500.3
n.a. Exportin-1; TAIR: AT5G17020.1 exportin 1A; Swiss-Prot: sp|Q9SMV6|XPO1A_ARATH Protein EXPORTIN 1A; TrEMBL-Plants: tr|I1LII4|I1LII4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0538500 LjG1.1_chr3 95486442 95497439 -
3 domain predictions
1 GO term