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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2184500 |
| Transcript ID | Lj2g3v2184500.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pathogenesis-related protein 5-like [Glycine max] gi|356551823|ref|XP_003544273.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 22 | 22 | 5 | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 8 | 8 | – | – | |
| Phobius | 1 | 25 | 25 | – | – | |
| PANTHER | 1 | 306 | 306 | 2.00E-197 | ||
| SignalP | 1 | 25 | 25 | – | – | |
| PIRSF | 1 | 303 | 303 | 8.20E-105 | ||
| PANTHER | 1 | 306 | 306 | 2.00E-197 | – | |
| Phobius | 9 | 20 | 12 | – | – | |
| TMHMM | 10 | 32 | 23 | – | – | |
| Phobius | 21 | 25 | 5 | – | – | |
| ProSiteProfiles | 25 | 252 | 228 | 42.824 | ||
| Phobius | 26 | 283 | 258 | – | – | |
| CDD | 27 | 249 | 223 | 1.05E-117 | – | |
| PRINTS | 27 | 39 | 13 | 6.90E-26 | ||
| SUPERFAMILY | 27 | 251 | 225 | 2.62E-81 | ||
| Gene3D | 28 | 251 | 224 | 1.70E-82 | ||
| SMART | 28 | 250 | 223 | 1.30E-106 | ||
| Pfam | 32 | 250 | 219 | 3.80E-83 | ||
| PRINTS | 75 | 86 | 12 | 6.90E-26 | ||
| PRINTS | 88 | 117 | 30 | 6.90E-26 | ||
| ProSitePatterns | 88 | 103 | 16 | – | ||
| PRINTS | 126 | 142 | 17 | 6.90E-26 | ||
| PRINTS | 240 | 249 | 10 | 6.90E-26 | ||
| TMHMM | 282 | 304 | 23 | – | – | |
| Phobius | 284 | 304 | 21 | – | – | |
| Phobius | 305 | 310 | 6 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj2g3v2184500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2184500.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.