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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2904850 |
| Transcript ID | Lj2g3v2904850.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | CM0545.410.nc [Lotus japonicus] gi|164605528|dbj|BAF98594.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 477 | 477 | – | – | |
| PANTHER | 1 | 527 | 527 | 1.60E-270 | – | |
| PANTHER | 1 | 527 | 527 | 1.60E-270 | – | |
| Gene3D | 4 | 198 | 195 | 3.60E-35 | ||
| ProSiteProfiles | 6 | 27 | 22 | 4.724 | ||
| ProSiteProfiles | 31 | 52 | 22 | 4.716 | ||
| SUPERFAMILY | 35 | 298 | 264 | 1.02E-51 | – | |
| SMART | 55 | 79 | 25 | 65 | ||
| ProSiteProfiles | 57 | 79 | 23 | 5.671 | ||
| ProSiteProfiles | 81 | 103 | 23 | 5.702 | ||
| Pfam | 83 | 101 | 19 | 0.86 | ||
| ProSiteProfiles | 155 | 174 | 20 | 5.471 | ||
| SMART | 177 | 201 | 25 | 130 | ||
| ProSiteProfiles | 179 | 200 | 22 | 5.302 | ||
| Gene3D | 203 | 305 | 103 | 3.70E-51 | ||
| Pfam | 224 | 240 | 17 | 0.12 | ||
| ProSiteProfiles | 227 | 250 | 24 | 5.964 | ||
| SMART | 275 | 299 | 25 | 66 | ||
| ProSiteProfiles | 277 | 299 | 23 | 5.579 | ||
| Pfam | 277 | 299 | 23 | 0.19 | ||
| SUPERFAMILY | 340 | 432 | 93 | 1.02E-51 | – | |
| Pfam | 345 | 402 | 58 | 4.10E-09 | ||
| Gene3D | 347 | 456 | 110 | 3.70E-51 | ||
| SMART | 365 | 388 | 24 | 280 | ||
| ProSiteProfiles | 367 | 390 | 24 | 6.734 | ||
| SMART | 389 | 412 | 24 | 62 | ||
| ProSiteProfiles | 391 | 414 | 24 | 7.096 | ||
| SMART | 413 | 436 | 24 | 300 | ||
| ProSiteProfiles | 415 | 436 | 22 | 5.925 | ||
| Phobius | 478 | 502 | 25 | – | – | |
| TMHMM | 484 | 503 | 20 | – | – | |
| Phobius | 503 | 537 | 35 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v2904850.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2904850.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.