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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2959630 |
| Transcript ID | Lj2g3v2959630.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: F-box/WD-40 repeat-containing protein At5g21040-like [Glycine max] gi|356501332|ref|XP_003519479.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 38 | 86 | 49 | – | – | |
| SUPERFAMILY | 90 | 176 | 87 | 2.75E-15 | ||
| ProSiteProfiles | 97 | 143 | 47 | 11.22 | ||
| PANTHER | 98 | 341 | 244 | 5.00E-132 | – | |
| PANTHER | 98 | 341 | 244 | 5.00E-132 | – | |
| Pfam | 99 | 144 | 46 | 1.60E-06 | ||
| Gene3D | 100 | 186 | 87 | 2.60E-11 | – | |
| SMART | 103 | 143 | 41 | 4.90E-07 | ||
| SMART | 185 | 224 | 40 | 0.022 | ||
| SUPERFAMILY | 189 | 511 | 323 | 1.25E-44 | ||
| ProSiteProfiles | 192 | 233 | 42 | 13.215 | ||
| ProSiteProfiles | 192 | 454 | 263 | 22.122 | ||
| Gene3D | 193 | 513 | 321 | 2.10E-46 | ||
| ProSitePatterns | 211 | 225 | 15 | – | ||
| PRINTS | 211 | 225 | 15 | 5.20E-05 | ||
| SMART | 227 | 264 | 38 | 54 | ||
| SMART | 281 | 318 | 38 | 1.10E-04 | ||
| ProSiteProfiles | 288 | 327 | 40 | 11.21 | ||
| Pfam | 290 | 318 | 29 | 4.00E-04 | ||
| PRINTS | 305 | 319 | 15 | 5.20E-05 | ||
| SMART | 321 | 356 | 36 | 2.1 | ||
| PANTHER | 358 | 559 | 202 | 5.00E-132 | – | |
| PANTHER | 358 | 559 | 202 | 5.00E-132 | – | |
| SMART | 359 | 399 | 41 | 0.068 | ||
| SMART | 409 | 445 | 37 | 1.6 | ||
| SMART | 472 | 509 | 38 | 1.8 | ||
| PRINTS | 496 | 510 | 15 | 5.20E-05 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v2959630.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2959630.1, powered by CORGI.
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