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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3022760 |
| Transcript ID | Lj2g3v3022760.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: dihydropyrimidinase-like isoform X1 [Cicer arietinum] gi|502098432|ref|XP_004491233.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 14 | 14 | – | – | |
| SignalP | 1 | 40 | 40 | – | – | |
| Phobius | 1 | 33 | 33 | – | – | |
| SignalP | 1 | 33 | 33 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 15 | 26 | 12 | – | – | |
| Phobius | 27 | 33 | 7 | – | – | |
| Phobius | 34 | 537 | 504 | – | – | |
| PANTHER | 41 | 530 | 490 | 4.30E-269 | – | |
| PANTHER | 41 | 530 | 490 | 4.30E-269 | – | |
| SFLD | 59 | 508 | 450 | 0 | – | |
| SFLD | 61 | 535 | 475 | 0 | – | |
| Gene3D | 61 | 127 | 67 | 2.50E-29 | ||
| SUPERFAMILY | 61 | 112 | 52 | 1.43E-33 | ||
| TIGRFAM | 62 | 512 | 451 | 9.30E-194 | ||
| CDD | 62 | 508 | 447 | 0 | ||
| Pfam | 109 | 495 | 387 | 2.30E-27 | ||
| SUPERFAMILY | 113 | 441 | 329 | 4.17E-96 | ||
| Gene3D | 128 | 434 | 307 | 4.50E-112 | – | |
| Gene3D | 435 | 516 | 82 | 3.10E-10 | ||
| SUPERFAMILY | 441 | 512 | 72 | 1.43E-33 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. | ||
| Molecular function | Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds. |
Expression pattern of Lj2g3v3022760.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3022760.1, powered by CORGI.
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