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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3164080 |
| Transcript ID | Lj2g3v3164080.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: calcium-dependent protein kinase 33-like isoform 1 [Glycine max] gi|356501529|ref|XP_003519577.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 73 | 73 | – | – | |
| Phobius | 1 | 269 | 269 | – | – | |
| PANTHER | 56 | 528 | 473 | 0 | – | |
| PANTHER | 56 | 528 | 473 | 0 | – | |
| Gene3D | 70 | 183 | 114 | 2.00E-33 | – | |
| SUPERFAMILY | 86 | 352 | 267 | 3.51E-85 | ||
| CDD | 86 | 344 | 259 | 7.06E-137 | – | |
| ProSiteProfiles | 87 | 345 | 259 | 48.357 | ||
| Pfam | 87 | 345 | 259 | 5.00E-75 | ||
| SMART | 87 | 345 | 259 | 9.70E-101 | ||
| ProSitePatterns | 93 | 116 | 24 | – | ||
| Gene3D | 184 | 368 | 185 | 2.80E-61 | – | |
| ProSitePatterns | 207 | 219 | 13 | – | ||
| Phobius | 270 | 288 | 19 | – | – | |
| Phobius | 289 | 535 | 247 | – | – | |
| Gene3D | 374 | 526 | 153 | 1.50E-47 | ||
| SUPERFAMILY | 384 | 524 | 141 | 8.02E-47 | ||
| ProSiteProfiles | 388 | 423 | 36 | 14.402 | ||
| SMART | 392 | 420 | 29 | 1.40E-04 | ||
| CDD | 393 | 452 | 60 | 3.66E-16 | ||
| Pfam | 393 | 453 | 61 | 3.70E-11 | ||
| ProSitePatterns | 401 | 413 | 13 | – | ||
| Coils | 410 | 430 | 21 | – | – | |
| ProSiteProfiles | 424 | 459 | 36 | 11.417 | ||
| SMART | 428 | 456 | 29 | 0.036 | ||
| ProSitePatterns | 437 | 449 | 13 | – | ||
| ProSiteProfiles | 460 | 495 | 36 | 15.601 | ||
| Pfam | 463 | 525 | 63 | 2.00E-13 | ||
| SMART | 464 | 492 | 29 | 6.20E-04 | ||
| CDD | 467 | 525 | 59 | 2.26E-19 | ||
| ProSitePatterns | 473 | 485 | 13 | – | ||
| ProSiteProfiles | 496 | 530 | 35 | 13.258 | ||
| SMART | 499 | 527 | 29 | 7.80E-08 | ||
| ProSitePatterns | 508 | 520 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj2g3v3164080.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3164080.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.