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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3248950 |
| Transcript ID | Lj2g3v3248950.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DUF21 domain-containing protein At1g55930, chloroplastic-like [Glycine max] gi|356553522|ref|XP_003545104.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 118 | 118 | – | – | |
| PANTHER | 32 | 402 | 371 | 8.10E-221 | – | |
| PANTHER | 32 | 402 | 371 | 8.10E-221 | – | |
| Phobius | 119 | 140 | 22 | – | – | |
| Phobius | 141 | 145 | 5 | – | – | |
| Phobius | 146 | 165 | 20 | – | – | |
| Phobius | 166 | 176 | 11 | – | – | |
| Pfam | 177 | 354 | 178 | 6.60E-44 | ||
| Phobius | 177 | 202 | 26 | – | – | |
| TMHMM | 178 | 200 | 23 | – | – | |
| Phobius | 203 | 226 | 24 | – | – | |
| TMHMM | 224 | 246 | 23 | – | – | |
| Phobius | 227 | 246 | 20 | – | – | |
| Phobius | 247 | 257 | 11 | – | – | |
| TMHMM | 250 | 272 | 23 | – | – | |
| Phobius | 258 | 277 | 20 | – | – | |
| Phobius | 278 | 296 | 19 | – | – | |
| TMHMM | 292 | 314 | 23 | – | – | |
| Phobius | 297 | 319 | 23 | – | – | |
| Phobius | 320 | 419 | 100 | – | – | |
| SUPERFAMILY | 356 | 402 | 47 | 2.72E-05 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj2g3v3248950.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3248950.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.