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Lj2g3v3319240.3

Overview

Field Value
Gene ID Lj2g3v3319240
Transcript ID Lj2g3v3319240.3
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: uridine kinase-like protein 4-like [Glycine max] gi|356552443|ref|XP_003544577.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10285:SF75
27 448 422 8.70E-294
IPR029930
PANTHER
PTHR10285
27 448 422 8.70E-294 –
Gene3D
G3DSA:3.40.50.300
29 234 206 1.00E-74
IPR027417
SUPERFAMILY
SSF52540
31 232 202 1.39E-45
IPR027417
TIGRFAM
TIGR00235
38 239 202 2.40E-69
IPR000764
PRINTS
PR00988
39 56 18 2.50E-28
IPR000764
CDD
cd02023
41 239 199 8.97E-101 –
Pfam
PF00485
41 227 187 3.30E-43
IPR006083
PRINTS
PR00988
69 80 12 2.50E-28
IPR000764
PRINTS
PR00988
114 129 16 2.50E-28
IPR000764
PRINTS
PR00988
171 181 11 2.50E-28
IPR000764
PRINTS
PR00988
185 196 12 2.50E-28
IPR000764
PRINTS
PR00988
207 220 14 2.50E-28
IPR000764
Gene3D
G3DSA:3.40.50.2020
238 459 222 2.80E-104
IPR029057
SUPERFAMILY
SSF53271
242 459 218 1.57E-60
IPR029057
Pfam
PF14681
257 458 202 2.70E-74
IPR029057
CDD
cd06223
316 431 116 7.18E-12
IPR000836

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0009116
Biological process Nucleoside metabolic process The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).
Subterm of
GO:0016301
Molecular function Kinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
Subterm of

Genome browser

LORE1 insertions 78

Expression data

Expression pattern

Expression pattern of Lj2g3v3319240.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v3319240.3, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.